RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TTLL11Q8NHH1 800 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 WASF1Q92558 559 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 LRRC45Q96CN5 670 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 CNDP2Q96KP4 475 aaKnown RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 CNOT6LQ96LI5 555 aaKnown RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 UBXN10Q96LJ8 280 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 FBXL18Q96ME1 805 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 CEP63Q96MT8 703 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 UHRF1Q96T88 793 aaPredicted RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 NEURL2Q9BR09 285 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 PRDM16Q9HAZ2 1276 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 ZFYVE28Q9HCC9 887 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 TIMMDC1Q9NPL8 285 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 DMAC2Q9NW81 257 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 CNOT11Q9UKZ1 510 aaKnown RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 CCPG1Q9ULG6 757 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 AXIN2Q9Y2T1 843 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 NOC2LQ9Y3T9 749 aaKnown RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 ALPK3Q96L96 1907 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 ESYT3A0FGR9 886 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 H0YJX3 145 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 ZNF195O14628 629 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 RGS13O14921 159 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 RAD21O60216 631 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 GGPS1O95749 300 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 DLDP09622 509 aaKnown RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 CREB1P16220 341 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 PTPN7P35236 360 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 PDE6CP51160 858 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 MAPK7Q13164 816 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 PDK4Q16654 411 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 IMMTQ16891 758 aaKnown RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 SBK1Q52WX2 424 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 ARMC3Q5W041 872 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 HIBCHQ6NVY1 386 aaPredicted RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 C8orf82Q6P1X6 216 aaPredicted RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 RFWD3Q6PCD5 774 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 ADGRA1Q86SQ6 560 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 CHSY1Q86X52 802 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 LSMEM2Q8N112 164 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 ARHGAP18Q8N392 663 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 ENAHQ8N8S7 591 aaPredicted RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 ERMNQ8TAM6 284 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 FNDC8Q8TC99 324 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 TUBGCP5Q96RT8 1024 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 INO80BQ9C086 356 aaPredicted RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 TMEM60Q9H2L4 133 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 C10orf88Q9H8K7 445 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 UBN1Q9NPG3 1134 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.43□□□□□ -1.7
USP16-205ENST00000474835 GIN1Q9NXP7 522 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 WHRNQ9P202 907 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 NAGPAQ9UK23 515 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 PCDHA4Q9UN74 947 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 TMED5Q9Y3A6 229 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 NUB1Q9Y5A7 615 aa4.43□□□□□ -1.7
USP16-205ENST00000474835 BZW2Q9Y6E2 419 aaKnown RBP4.43□□□□□ -1.7
USP16-205ENST00000474835 MYH9P35579 1960 aaKnown RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 SMIM31A0A1B0GVY4 71 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 MAGEA13PA6NCF6 341 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 BTBD11A6QL63 1104 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 A8MXQ7 604 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 E7ESA3 106 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 CCNT2O60583 730 aaKnown RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 USO1O60763 962 aaKnown RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 MBD4O95243 580 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 LMNAP02545 664 aaKnown RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 CDC25CP30307 473 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 GSTT1P30711 240 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 BMP8BP34820 402 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 RFC5P40937 340 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 RPL21P46778 160 aaKnown RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 CCT8P50990 548 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 NEK3P51956 506 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 GFPT1Q06210 699 aaPredicted RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 ENPEPQ07075 957 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 KPNB1Q14974 876 aaKnown RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 SLC27A3Q5K4L6 730 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 RABGAP1LQ5R372 815 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 BMP8AQ7Z5Y6 402 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 NUP93Q8N1F7 819 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 ALLCQ8N6M5 410 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 CCDC114Q96M63 670 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 CCDC106Q9BWC9 280 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 GRIP2Q9C0E4 1043 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 ASCC2Q9H1I8 757 aaPredicted RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 MKNK2Q9HBH9 465 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 PCDHA8Q9Y5H6 950 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 MYPNQ86TC9 1320 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 TCRBV5S1A1TA0A578 114 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 P4HA2O15460 535 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 GSC2O15499 205 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 ZBTB43O43298 467 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 SORBS3O60504 671 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 TACC1O75410 805 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 MMEP08473 750 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 GBP1P32455 592 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 CCT6AP40227 531 aaKnown RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 UBXN1Q04323 297 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 KLC1Q07866 573 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms