RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 LARP4BQ92615 738 aaKnown RBP15.66■□□□□ 0.1
VAMP4-203ENST00000474047 PPP2R3CQ969Q6 453 aa15.66■□□□□ 0.1
VAMP4-203ENST00000474047 ZHX3Q9H4I2 956 aa15.66■□□□□ 0.1
VAMP4-203ENST00000474047 NSUN3Q9H649 340 aaKnown RBP15.66■□□□□ 0.1
VAMP4-203ENST00000474047 SPG21Q9NZD8 308 aa15.66■□□□□ 0.1
VAMP4-203ENST00000474047 PARP2Q9UGN5 583 aa15.66■□□□□ 0.1
VAMP4-203ENST00000474047 HES2Q9Y543 173 aa15.66■□□□□ 0.1
VAMP4-203ENST00000474047 KIAA1671Q9BY89 1806 aa15.66■□□□□ 0.1
VAMP4-203ENST00000474047 PHLPP2Q6ZVD8 1323 aa15.66■□□□□ 0.1
VAMP4-203ENST00000474047 NPHP3-ACAD11A0A0J9YXS1 232 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 CARNS1A5YM72 827 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 SLC16A4O15374 487 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 FAM13AO94988 1023 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 PLS3P13797 630 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 DDIT3P35638 169 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 CACNB1Q02641 598 aaPredicted RBP15.65■□□□□ 0.1
VAMP4-203ENST00000474047 UBE3AQ05086 875 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 STRN3Q13033 797 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 USP49Q70CQ1 688 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 DAW1Q8N136 415 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 HLA-CQ95604 372 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 CCDC113Q9H0I3 377 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 TBC1D13Q9NVG8 400 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 LARSQ9P2J5 1176 aaKnown RBP15.65■□□□□ 0.1
VAMP4-203ENST00000474047 CFAP45Q9UL16 551 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 PPP6R2O75170 966 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 TBCAO75347 108 aaKnown RBP15.65■□□□□ 0.1
VAMP4-203ENST00000474047 YEATS4O95619 227 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 POMCP01189 267 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 PBX3P40426 434 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 BCAR1P56945 870 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 MAPK7Q13164 816 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 PKP1Q13835 747 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 AAK1Q2M2I8 961 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 ATL3Q6DD88 541 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 CCDC73Q6ZRK6 1079 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 MYCT1Q8N699 235 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 PANK2Q9BZ23 570 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 NXF3Q9H4D5 531 aaKnown RBP15.65■□□□□ 0.1
VAMP4-203ENST00000474047 TMEM134Q9H6X4 195 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 BLOC1S4Q9NUP1 217 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 STK17AQ9UEE5 414 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 ODF2LQ9ULJ1 636 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 COG5Q9UP83 839 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 USP20Q9Y2K6 914 aa15.65■□□□□ 0.1
VAMP4-203ENST00000474047 MORC2Q9Y6X9 1032 aaPredicted RBP15.65■□□□□ 0.1
VAMP4-203ENST00000474047 MYH11P35749 1972 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 H0YCG3 227 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 AKAP5P24588 427 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 STAT6P42226 847 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 MRPS5P82675 430 aaKnown RBP15.64■□□□□ 0.09
VAMP4-203ENST00000474047 BMS1Q14692 1282 aaKnown RBP15.64■□□□□ 0.09
VAMP4-203ENST00000474047 ARSHQ5FYA8 562 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 TCEAL5Q5H9L2 206 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 ATF7IP2Q5U623 682 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 SV2BQ7L1I2 683 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 ATXN2LQ8WWM7 1075 aaKnown RBP15.64■□□□□ 0.09
VAMP4-203ENST00000474047 RPS6KC1Q96S38 1066 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 GAD1Q99259 594 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 TCHPQ9BT92 498 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 PDZD7Q9H5P4 517 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 GIT1Q9Y2X7 761 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 MYH15Q9Y2K3 1946 aa15.64■□□□□ 0.09
VAMP4-203ENST00000474047 ARL5CA6NH57 179 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 NT5C1B-RDH14C9J2C7 533 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 MLH1P40692 756 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 ME1P48163 572 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 PLCB3Q01970 1234 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 DCAF4L1Q3SXM0 396 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 KCNG4Q8TDN1 519 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 SPIRE2Q8WWL2 714 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 MRPS27Q92552 414 aaKnown RBP15.63■□□□□ 0.09
VAMP4-203ENST00000474047 TMEM169Q96HH4 297 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 REEP2Q9BRK0 252 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 MRPL4Q9BYD3 311 aaKnown RBP15.63■□□□□ 0.09
VAMP4-203ENST00000474047 IGFLR1Q9H665 355 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 NRDE2Q9H7Z3 1164 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 TLR9Q9NR96 1032 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 COL6A3P12111 3177 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 TTLL13PA6NNM8 815 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 NCK2O43639 380 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 CUTAO60888 179 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 NR1I2O75469 434 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 ALDH2P05091 517 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 DNAJB1P25685 340 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 CA8P35219 290 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 NT5DC1Q5TFE4 455 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 PDE12Q6L8Q7 609 aaKnown RBP15.63■□□□□ 0.09
VAMP4-203ENST00000474047 PDILTQ8N807 584 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 BICD1Q96G01 975 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 NTPCRQ9BSD7 190 aaKnown RBP15.63■□□□□ 0.09
VAMP4-203ENST00000474047 PARVGQ9HBI0 331 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 ENTPD7Q9NQZ7 604 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 KLK14Q9P0G3 267 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 ARHGAP28Q9P2N2 729 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 LZTS1Q9Y250 596 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 FAN1Q9Y2M0 1017 aa15.63■□□□□ 0.09
VAMP4-203ENST00000474047 TRANK1O15050 2925 aa15.62■□□□□ 0.09
VAMP4-203ENST00000474047 MATR3P43243 847 aaKnown RBP eCLIP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms