RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 CCDC113Q9H0I3 377 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 TNMDQ9H2S6 317 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 RSAD1Q9HA92 442 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 MAGEF1Q9HAY2 307 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 TYW1Q9NV66 732 aaKnown RBP15.12■□□□□ 0.01
USF1-205ENST00000473969 PARP2Q9UGN5 583 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 KCNH3Q9ULD8 1083 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 INPP5FQ9Y2H2 1132 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 STXBP5LQ9Y2K9 1186 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 IPPQ9Y573 584 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 MRPL42Q9Y6G3 142 aaKnown RBP15.12■□□□□ 0.01
USF1-205ENST00000473969 SZT2Q5T011 3432 aa15.12■□□□□ 0.01
USF1-205ENST00000473969 A0A087X0B3 334 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 CARNS1A5YM72 827 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 MYMKA6NI61 221 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 K7ENM7 598 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 RFXAPO00287 272 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 ATF7P17544 494 aaPredicted RBP15.11■□□□□ 0.01
USF1-205ENST00000473969 GAP43P17677 238 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 LAG3P18627 525 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 MATR3P43243 847 aaKnown RBP eCLIP15.11■□□□□ 0.01
USF1-205ENST00000473969 GPM6BQ13491 265 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 PTPROQ16827 1216 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 CSPP1Q1MSJ5 1256 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 DCAF4L1Q3SXM0 396 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 NOMO2Q5JPE7 1267 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 CLLU1OSQ5K130 101 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 HAUS6Q7Z4H7 955 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 CCDC65Q8IXS2 484 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 TMEM161BQ8NDZ6 487 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 CHAMP1Q96JM3 812 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 FAM193BQ96PV7 902 aaPredicted RBP15.11■□□□□ 0.01
USF1-205ENST00000473969 PLVAPQ9BX97 442 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 KANSL3Q9P2N6 904 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 SEL1LQ9UBV2 794 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 LAMA3Q16787 3333 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 PTPRSQ13332 1948 aa15.11■□□□□ 0.01
USF1-205ENST00000473969 GBF1Q92538 1859 aa15.1■□□□□ 0.01
USF1-205ENST00000473969 OFD1O75665 1012 aa15.1■□□□□ 0.01
USF1-205ENST00000473969 MAPTP10636 758 aaKnown RBP15.1■□□□□ 0.01
USF1-205ENST00000473969 ZNF131P52739 623 aa15.1■□□□□ 0.01
USF1-205ENST00000473969 NCKAP1LP55160 1127 aa15.1■□□□□ 0.01
USF1-205ENST00000473969 HERC4Q5GLZ8 1057 aaPredicted RBP15.1■□□□□ 0.01
USF1-205ENST00000473969 SPRED2Q7Z698 418 aa15.1■□□□□ 0.01
USF1-205ENST00000473969 THNSL1Q8IYQ7 743 aa15.1■□□□□ 0.01
USF1-205ENST00000473969 GDPD5Q8WTR4 605 aa15.1■□□□□ 0.01
USF1-205ENST00000473969 CCDC34Q96HJ3 373 aa15.1■□□□□ 0.01
USF1-205ENST00000473969 ACO2Q99798 780 aaKnown RBP15.1■□□□□ 0.01
USF1-205ENST00000473969 PDZD7Q9H5P4 517 aa15.1■□□□□ 0.01
USF1-205ENST00000473969 PANK4Q9NVE7 773 aa15.1■□□□□ 0.01
USF1-205ENST00000473969 CHMP5Q9NZZ3 219 aa15.1■□□□□ 0.01
USF1-205ENST00000473969 USP25Q9UHP3 1055 aa15.1■□□□□ 0.01
USF1-205ENST00000473969 TNFSF13BQ9Y275 285 aa15.1■□□□□ 0.01
USF1-205ENST00000473969 GIT1Q9Y2X7 761 aa15.1■□□□□ 0.01
USF1-205ENST00000473969 A0A1B0GVL5 298 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 EPOPA6NHQ4 379 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 C5orf67F2Z3F1 127 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 H3BNC9 293 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 PFKFB1P16118 471 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 SYKP43405 635 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 ALDH7A1P49419 539 aaKnown RBP15.09■□□□□ 0.01
USF1-205ENST00000473969 ASIC1P78348 528 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 E2F4Q16254 413 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 ZNF568Q3ZCX4 644 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 NT5DC1Q5TFE4 455 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 AGMOQ6ZNB7 445 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 MICALL1Q8N3F8 863 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 SMG8Q8ND04 991 aaKnown RBP15.09■□□□□ 0.01
USF1-205ENST00000473969 STAMQ92783 540 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 P2RX5Q93086 422 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 ZNF558Q96NG5 402 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 RPS6KC1Q96S38 1066 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 TARS2Q9BW92 718 aaKnown RBP15.09■□□□□ 0.01
USF1-205ENST00000473969 MRPL44Q9H9J2 332 aaKnown RBP15.09■□□□□ 0.01
USF1-205ENST00000473969 GDPD2Q9HCC8 539 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 RNF19AQ9NV58 838 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 KBTBD4Q9NVX7 518 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 LMCD1Q9NZU5 365 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 USP20Q9Y2K6 914 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 HES2Q9Y543 173 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 COL4A6Q14031 1691 aa15.09■□□□□ 0.01
USF1-205ENST00000473969 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.08■□□□□ 0
USF1-205ENST00000473969 A0A1W2PQ27 194 aa15.08■□□□□ 0
USF1-205ENST00000473969 A0A1W2PQ64 194 aa15.08■□□□□ 0
USF1-205ENST00000473969 A0A1W2PQD8 194 aa15.08■□□□□ 0
USF1-205ENST00000473969 TTLL13PA6NNM8 815 aa15.08■□□□□ 0
USF1-205ENST00000473969 NR1I2O75469 434 aa15.08■□□□□ 0
USF1-205ENST00000473969 AKAP5P24588 427 aa15.08■□□□□ 0
USF1-205ENST00000473969 PPM1AP35813 382 aa15.08■□□□□ 0
USF1-205ENST00000473969 LIG4P49917 911 aa15.08■□□□□ 0
USF1-205ENST00000473969 YARSP54577 528 aaKnown RBP15.08■□□□□ 0
USF1-205ENST00000473969 KRT17Q04695 432 aa15.08■□□□□ 0
USF1-205ENST00000473969 MPZL3Q6UWV2 235 aa15.08■□□□□ 0
USF1-205ENST00000473969 ZPBP2Q6X784 338 aa15.08■□□□□ 0
USF1-205ENST00000473969 STXBP4Q6ZWJ1 553 aa15.08■□□□□ 0
USF1-205ENST00000473969 ZBTB33Q86T24 672 aa15.08■□□□□ 0
USF1-205ENST00000473969 SFR1Q86XK3 245 aa15.08■□□□□ 0
USF1-205ENST00000473969 FSIP1Q8NA03 581 aa15.08■□□□□ 0
USF1-205ENST00000473969 COLGALT1Q8NBJ5 622 aa15.08■□□□□ 0
USF1-205ENST00000473969 MAFAQ8NHW3 353 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms