RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 FAM102BQ5T8I3 360 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 ARL6IP4Q66PJ3 421 aaKnown RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 CMTR2Q8IYT2 770 aaKnown RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 IGSF22Q8N9C0 903 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 NEK9Q8TD19 979 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 BAP1Q92560 729 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 FAM167AQ96KS9 214 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 RAB34Q9BZG1 259 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 ADAMTS10Q9H324 1103 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 NSUN3Q9H649 340 aaKnown RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 EPHX3Q9H6B9 360 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 RGS18Q9NS28 235 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 WRAP73Q9P2S5 460 aaPredicted RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 TFIP11Q9UBB9 837 aaKnown RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 LRWD1Q9UFC0 647 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 PLAGL2Q9UPG8 496 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 PCDHGC5Q9Y5F6 944 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 LINC01565O15544 149 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 DKC1O60832 514 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMC4-213ENST00000472282 MED24O75448 989 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 RB1P06400 928 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 FGFR1P11362 822 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 FGFR4P22455 802 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 CCT6AP40227 531 aaKnown RBP10.17□□□□□ -0.78
SMC4-213ENST00000472282 NUCB2P80303 420 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 GRIN1Q05586 938 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 HYAL1Q12794 435 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 SUZ12Q15022 739 aaKnown RBP10.17□□□□□ -0.78
SMC4-213ENST00000472282 TARBP2Q15633 366 aaKnown RBP10.17□□□□□ -0.78
SMC4-213ENST00000472282 MTERF2Q49AM1 385 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 HAUS3Q68CZ6 603 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 PLA2G4FQ68DD2 849 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 ADGRD2Q7Z7M1 963 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 TPH2Q8IWU9 490 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 ZNF511Q8NB15 262 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 KLHL23Q8NBE8 558 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 ERMNQ8TAM6 284 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 SPPL3Q8TCT6 385 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 SNX29Q8TEQ0 813 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 PABPC5Q96DU9 382 aaKnown RBP10.17□□□□□ -0.78
SMC4-213ENST00000472282 CHAMP1Q96JM3 812 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 C11orf84Q9BUA3 381 aaPredicted RBP10.17□□□□□ -0.78
SMC4-213ENST00000472282 ZSWIM4Q9H7M6 989 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 TUFT1Q9NNX1 390 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 RNF19AQ9NV58 838 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 LRFN2Q9ULH4 789 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 AKT3Q9Y243 479 aa10.17□□□□□ -0.78
SMC4-213ENST00000472282 NCOR1O75376 2440 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 MUC3AQ02505 3323 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 DENND3A2RUS2 1198 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 TBKBP1A7MCY6 615 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 GPR182O15218 404 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 MAGEB2O15479 319 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 TBX10O75333 385 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 CSDE1O75534 798 aaKnown RBP10.16□□□□□ -0.78
SMC4-213ENST00000472282 SLITRK3O94933 977 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 YEATS4O95619 227 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 STAG3L1P0CL83 205 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 SPATA31C1P0DKV0 1188 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 NCLP19338 710 aaKnown RBP10.16□□□□□ -0.78
SMC4-213ENST00000472282 CDC25AP30304 524 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 GPC3P51654 580 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 PDIA5Q14554 519 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 SLC39A14Q15043 492 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 XKR3Q5GH77 459 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 EP400NLQ6ZTU2 488 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 SLC24A5Q71RS6 500 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 ANO5Q75V66 913 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 CATSPER3Q86XQ3 398 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 FAM178BQ8IXR5 827 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 C4orf19Q8IY42 314 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 LINC00301Q8NCQ3 95 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 P2RX5Q93086 422 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 HSD17B14Q9BPX1 270 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 POLR3CQ9BUI4 534 aaPredicted RBP10.16□□□□□ -0.78
SMC4-213ENST00000472282 PLVAPQ9BX97 442 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 NIFKQ9BYG3 293 aaKnown RBP10.16□□□□□ -0.78
SMC4-213ENST00000472282 LMAN2LQ9H0V9 348 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 NRBP2Q9NSY0 501 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 CLDND1Q9NY35 253 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 NXF1Q9UBU9 619 aaKnown RBP10.16□□□□□ -0.78
SMC4-213ENST00000472282 FBXO2Q9UK22 296 aaPredicted RBP10.16□□□□□ -0.78
SMC4-213ENST00000472282 RWDD3Q9Y3V2 267 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 PCDHB7Q9Y5E2 793 aa10.16□□□□□ -0.78
SMC4-213ENST00000472282 TDRD15B5MCY1 1934 aaKnown RBP10.15□□□□□ -0.78
SMC4-213ENST00000472282 IGKV6-21A0A0C4DH24 114 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 ZBTB39O15060 712 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 SPTLC2O15270 562 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 LYPLA2O95372 231 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 RPA1P27694 616 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 YWHABP31946 246 aaKnown RBP10.15□□□□□ -0.78
SMC4-213ENST00000472282 CTHP32929 405 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 LONP1P36776 959 aaKnown RBP10.15□□□□□ -0.78
SMC4-213ENST00000472282 FAM189BP81408 668 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 TBC1D8BQ0IIM8 1120 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 CLUL1Q15846 466 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 ECM1Q16610 540 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 SPECC1Q5M775 1068 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 KRT79Q5XKE5 535 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 ATL3Q6DD88 541 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms