RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 SATB1Q01826 763 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 FZD5Q13467 585 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 CCDC6Q16204 474 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 IMMTQ16891 758 aaKnown RBP11.59□□□□□ -0.55
CDHR3-209ENST00000472116 ZNF589Q86UQ0 364 aaPredicted RBP11.59□□□□□ -0.55
CDHR3-209ENST00000472116 ZNF280BQ86YH2 543 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 GLYCTKQ8IVS8 523 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 ZNF668Q96K58 619 aaPredicted RBP11.59□□□□□ -0.55
CDHR3-209ENST00000472116 MXRA8Q9BRK3 442 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 TRAIPQ9BWF2 469 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 GCOM2Q9BZD3 368 aaPredicted RBP11.59□□□□□ -0.55
CDHR3-209ENST00000472116 BRD9Q9H8M2 597 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 FAM105AQ9NUU6 356 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 PIN4Q9Y237 131 aaKnown RBP11.59□□□□□ -0.55
CDHR3-209ENST00000472116 PRG3Q9Y2Y8 225 aaPredicted RBP11.59□□□□□ -0.55
CDHR3-209ENST00000472116 HELZ2Q9BYK8 2649 aaKnown RBP11.59□□□□□ -0.55
CDHR3-209ENST00000472116 NBEAQ8NFP9 2946 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 NUP205Q92621 2012 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 IGKV6D-21A0A0A0MT36 114 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 ZBTB42B2RXF5 422 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 ATMINO43313 823 aaPredicted RBP11.58□□□□□ -0.56
CDHR3-209ENST00000472116 ECI2O75521 394 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 HNRNPA1P09651 372 aaKnown RBP eCLIP11.58□□□□□ -0.56
CDHR3-209ENST00000472116 C7P10643 843 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 OR1G1P47890 313 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 GPC3P51654 580 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 DSG1Q02413 1049 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 NMIQ13287 307 aaPredicted RBP11.58□□□□□ -0.56
CDHR3-209ENST00000472116 LRRC32Q14392 662 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 PPM1LQ5SGD2 360 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 SWSAP1Q6NVH7 229 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 PDZD3Q86UT5 571 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 TICAM2Q86XR7 235 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 CCDC60Q8IWA6 550 aaPredicted RBP11.58□□□□□ -0.56
CDHR3-209ENST00000472116 SPEM1Q8N4L4 309 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 LRRC71Q8N4P6 559 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 FAM3CQ92520 227 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 FAM167AQ96KS9 214 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 INO80BQ9C086 356 aaPredicted RBP11.58□□□□□ -0.56
CDHR3-209ENST00000472116 PCDHA6Q9UN73 950 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 PCDHA8Q9Y5H6 950 aa11.58□□□□□ -0.56
CDHR3-209ENST00000472116 DDHD2O94830 711 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 EPN2O95208 641 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 SEC24BO95487 1268 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 NTHL1P78549 312 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 CDC42EP1Q00587 391 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 TRDNQ13061 729 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 SLC35G1Q2M3R5 365 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 ABHD15Q6UXT9 468 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 CACNA2D4Q7Z3S7 1137 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 EDEM2Q9BV94 578 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 RSAD1Q9HA92 442 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 AGO4Q9HCK5 861 aaKnown RBP11.57□□□□□ -0.56
CDHR3-209ENST00000472116 VPS45Q9NRW7 570 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 PCDHGA5Q9Y5G8 931 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 CNTNAP2Q9UHC6 1331 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 NOTCH4Q99466 2003 aa11.57□□□□□ -0.56
CDHR3-209ENST00000472116 GIPC1O14908 333 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 ZNF623O75123 536 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 POMCP01189 267 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 CCDC192P0DO97 292 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 ZNF76P36508 570 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 ITGB3BPQ13352 177 aaPredicted RBP11.56□□□□□ -0.56
CDHR3-209ENST00000472116 SART3Q15020 963 aaKnown RBP11.56□□□□□ -0.56
CDHR3-209ENST00000472116 SEC23AQ15436 765 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 UBE2SQ16763 222 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 USP41Q3LFD5 358 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 SH3PXD2AQ5TCZ1 1133 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 OTUD7AQ8TE49 926 aaPredicted RBP11.56□□□□□ -0.56
CDHR3-209ENST00000472116 IRF7Q92985 503 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 LY9Q9HBG7 655 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 FNIP2Q9P278 1114 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 KCNH3Q9ULD8 1083 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 NEUROG3Q9Y4Z2 214 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 SHROOM3Q8TF72 1996 aa11.56□□□□□ -0.56
CDHR3-209ENST00000472116 PCNX2A6NKB5 2137 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 MEIS3P2A8K0S8 358 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 CCL16O15467 120 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 B4GALT3O60512 393 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 CSDE1O75534 798 aaKnown RBP11.55□□□□□ -0.56
CDHR3-209ENST00000472116 CCNE2O96020 404 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 C8AP07357 584 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 CEACAM1P13688 526 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 MPLP40238 635 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 PABPC1LQ4VXU2 614 aaKnown RBP11.55□□□□□ -0.56
CDHR3-209ENST00000472116 CEP55Q53EZ4 464 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 C19orf48Q6RUI8 117 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 TAS1R1Q7RTX1 841 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 CATSPER4Q7RTX7 472 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 CATIPQ7Z7H3 387 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 NPAS3Q8IXF0 933 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 GPR65Q8IYL9 337 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 CTCFLQ8NI51 663 aaPredicted RBP11.55□□□□□ -0.56
CDHR3-209ENST00000472116 ITFG1Q8TB96 612 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 COLEC11Q9BWP8 271 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 MARCH5Q9NX47 278 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 WASF3Q9UPY6 502 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 MRPS23Q9Y3D9 190 aaKnown RBP11.55□□□□□ -0.56
CDHR3-209ENST00000472116 PCDHB2Q9Y5E7 798 aa11.55□□□□□ -0.56
CDHR3-209ENST00000472116 DMXL2Q8TDJ6 3036 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms