RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 CASP4P49662 377 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 CRYBB1P53674 252 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-233ENST00000470710 AMHR2Q16671 573 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 VWA3BQ502W6 1294 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 FAM47CQ5HY64 1035 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 MIIPQ5JXC2 388 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 CEP135Q66GS9 1140 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 RSPH3Q86UC2 560 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 CREBRFQ8IUR6 639 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 VSTM4Q8IW00 320 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 PPP1R13LQ8WUF5 828 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 DNAJB3Q8WWF6 145 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 POMGNT1Q8WZA1 660 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 VTI1AQ96AJ9 217 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 SCLT1Q96NL6 688 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 DEFB118Q96PH6 123 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 NOC4LQ9BVI4 516 aaKnown RBP9.51□□□□□ -0.89
HDLBP-233ENST00000470710 TARS2Q9BW92 718 aaKnown RBP9.51□□□□□ -0.89
HDLBP-233ENST00000470710 INO80BQ9C086 356 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-233ENST00000470710 CRISPLD2Q9H0B8 497 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 RNF208Q9H0X6 261 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 VPS16Q9H269 839 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 MINDY3Q9H8M7 445 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 KIAA1586Q9HCI6 787 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 PTPRHQ9HD43 1115 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 MYH11P35749 1972 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 CNTNAP2Q9UHC6 1331 aa9.51□□□□□ -0.89
HDLBP-233ENST00000470710 A0A1W2PQC6 194 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 ABLIM1O14639 778 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 TEX33O43247 280 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 EXTL3O43909 919 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 CAND2O75155 1236 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 IQCF3P0C7M6 154 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 EIF4BP23588 611 aaKnown RBP9.5□□□□□ -0.89
HDLBP-233ENST00000470710 MRPS6P82932 125 aaKnown RBP9.5□□□□□ -0.89
HDLBP-233ENST00000470710 MCL1Q07820 350 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 PTK7Q13308 1070 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 PRPF4BQ13523 1007 aaKnown RBP9.5□□□□□ -0.89
HDLBP-233ENST00000470710 PTGISQ16647 500 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 KIZQ2M2Z5 673 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 ATF7IP2Q5U623 682 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 MPZL3Q6UWV2 235 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 INTS8Q75QN2 995 aaKnown RBP9.5□□□□□ -0.89
HDLBP-233ENST00000470710 GPD1LQ8N335 351 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 ZNF668Q96K58 619 aaPredicted RBP9.5□□□□□ -0.89
HDLBP-233ENST00000470710 MSTO1Q9BUK6 570 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 NDST4Q9H3R1 872 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 PCIF1Q9H4Z3 704 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 STARD7Q9NQZ5 370 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 AGO2Q9UKV8 859 aaKnown RBP9.5□□□□□ -0.89
HDLBP-233ENST00000470710 TNFSF13BQ9Y275 285 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.5□□□□□ -0.89
HDLBP-233ENST00000470710 ITIH6Q6UXX5 1313 aa9.5□□□□□ -0.89
HDLBP-233ENST00000470710 TTLL13PA6NNM8 815 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 GOLGA6L6A8MZA4 724 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 M0QZ92 97 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 ARVCFO00192 962 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 CLDN3O15551 220 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 B4GALT5O43286 388 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 TSPAN1O60635 241 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 LDHAP00338 332 aaKnown RBP9.49□□□□□ -0.89
HDLBP-233ENST00000470710 ADRB2P07550 413 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 KRT13P13646 458 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 CAPN2P17655 700 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 SFPQP23246 707 aaKnown RBP eCLIP9.49□□□□□ -0.89
HDLBP-233ENST00000470710 POU5F1Q01860 360 aaKnown RBP9.49□□□□□ -0.89
HDLBP-233ENST00000470710 UBXN1Q04323 297 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 CYP24A1Q07973 514 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 BFSP1Q12934 665 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 NOLC1Q14978 699 aaKnown RBP eCLIP9.49□□□□□ -0.89
HDLBP-233ENST00000470710 SNX17Q15036 470 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 SNRNP35Q16560 246 aaKnown RBP9.49□□□□□ -0.89
HDLBP-233ENST00000470710 TRIM71Q2Q1W2 868 aaKnown RBP9.49□□□□□ -0.89
HDLBP-233ENST00000470710 FKBP15Q5T1M5 1219 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 SPECC1LQ69YQ0 1117 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 CBWD2Q8IUF1 395 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 DRC7Q8IY82 874 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 ZSWIM2Q8NEG5 633 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 TMC2Q8TDI7 906 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 SLC35C1Q96A29 364 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 SAAL1Q96ER3 474 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 ZBTB45Q96K62 511 aaPredicted RBP9.49□□□□□ -0.89
HDLBP-233ENST00000470710 MFSD14AQ96MC6 490 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 ERGIC2Q96RQ1 377 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 PPP1R16BQ96T49 567 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 OSMRQ99650 979 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 CELF4Q9BZC1 486 aaKnown RBP9.49□□□□□ -0.89
HDLBP-233ENST00000470710 SENP6Q9GZR1 1112 aaPredicted RBP9.49□□□□□ -0.89
HDLBP-233ENST00000470710 HAPLN2Q9GZV7 340 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 CDHR5Q9HBB8 845 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 IMPACTQ9P2X3 320 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 USP20Q9Y2K6 914 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 TRPV2Q9Y5S1 764 aa9.49□□□□□ -0.89
HDLBP-233ENST00000470710 CENPFP49454 3210 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 SIP14410 1827 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 A0A1B0GUA9 196 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 GTPBP10A4D1E9 387 aaKnown RBP9.48□□□□□ -0.89
HDLBP-233ENST00000470710 GOLGA8IPA6NC78 632 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 ZNF233A6NK53 670 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 GOLGA8JA6NMD2 632 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms