RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 MYH9P35579 1960 aaKnown RBP9.97□□□□□ -0.81
XRN1-208ENST00000470537 CCDC196A0A1B0GTZ2 297 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 WDR64B1ANS9 1081 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 DHX15O43143 795 aaKnown RBP9.96□□□□□ -0.82
XRN1-208ENST00000470537 RXRAP19793 462 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 GNA11P29992 359 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 SFNP31947 248 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 RAB27AP51159 221 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 CLCN3P51790 818 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 CLLU1OSQ5K130 101 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 WWC2Q6AWC2 1192 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 TWF2Q6IBS0 349 aaKnown RBP9.96□□□□□ -0.82
XRN1-208ENST00000470537 MICU3Q86XE3 530 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 GPR161Q8N6U8 529 aaKnown RBP9.96□□□□□ -0.82
XRN1-208ENST00000470537 C12orf76Q8N812 135 aaPredicted RBP9.96□□□□□ -0.82
XRN1-208ENST00000470537 URGCPQ8TCY9 931 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 SLC22A17Q8WUG5 538 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 SPIRE2Q8WWL2 714 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 BAP1Q92560 729 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 FAM193BQ96PV7 902 aaPredicted RBP9.96□□□□□ -0.82
XRN1-208ENST00000470537 JPH2Q9BR39 696 aaPredicted RBP9.96□□□□□ -0.82
XRN1-208ENST00000470537 IL25Q9H293 177 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 ADAMTS10Q9H324 1103 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 C6orf50Q9HD87 102 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 MRPL17Q9NRX2 175 aaKnown RBP9.96□□□□□ -0.82
XRN1-208ENST00000470537 RNF19AQ9NV58 838 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 GABBR1Q9UBS5 961 aa9.96□□□□□ -0.82
XRN1-208ENST00000470537 ZNF292O60281 2723 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 NT5C1B-RDH14C9J2C7 533 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 FAM86B1E9PN63 330 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 ZBTB43O43298 467 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 ZNF623O75123 536 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 C1RP00736 705 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 ADH1AP07327 375 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 GALTP07902 379 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 WEE2P0C1S8 567 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 FAM86B2P0C5J1 330 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 EPCAMP16422 314 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 ATP4AP20648 1035 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 PHKA2P46019 1235 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 GPC3P51654 580 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 RTN1Q16799 776 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 NOMO2Q5JPE7 1267 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 CWF19L1Q69YN2 538 aaKnown RBP9.95□□□□□ -0.82
XRN1-208ENST00000470537 EXOC8Q8IYI6 725 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 CMASQ8NFW8 434 aaPredicted RBP9.95□□□□□ -0.82
XRN1-208ENST00000470537 PRR7Q8TB68 274 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 BICD2Q8TD16 824 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 RUBCNQ92622 972 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 SHDQ96IW2 340 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 ZFP42Q96MM3 310 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 RHOBTB2Q9BYZ6 727 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.95□□□□□ -0.82
XRN1-208ENST00000470537 GVINP1Q7Z2Y8 2422 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 FRYLO94915 3013 aa9.95□□□□□ -0.82
XRN1-208ENST00000470537 H3BM21 787 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 PI15O43692 258 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 SRFP11831 508 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 NPR3P17342 541 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 NDUFV2P19404 249 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 GBP2P32456 591 aaPredicted RBP9.94□□□□□ -0.82
XRN1-208ENST00000470537 CLK2P49760 499 aaKnown RBP9.94□□□□□ -0.82
XRN1-208ENST00000470537 JAK3P52333 1124 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 KCNH2Q12809 1159 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 PHLDB3Q6NSJ2 640 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 ZNF410Q86VK4 478 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 REXO1Q8N1G1 1221 aaKnown RBP9.94□□□□□ -0.82
XRN1-208ENST00000470537 LRRC71Q8N4P6 559 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 ZNF511Q8NB15 262 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 ZSCAN1Q8NBB4 408 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 HDAC7Q8WUI4 952 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 SECISBP2LQ93073 1101 aaKnown RBP9.94□□□□□ -0.82
XRN1-208ENST00000470537 PGBD1Q96JS3 809 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 RIT2Q99578 217 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 SMOC2Q9H3U7 446 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 UBN1Q9NPG3 1134 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 DISC1Q9NRI5 854 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 CDH22Q9UJ99 828 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 FAN1Q9Y2M0 1017 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 SIT1Q9Y3P8 196 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 TAF6LQ9Y6J9 622 aa9.94□□□□□ -0.82
XRN1-208ENST00000470537 ZFP37Q9Y6Q3 630 aaPredicted RBP9.94□□□□□ -0.82
XRN1-208ENST00000470537 CACNA1AO00555 2505 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 EP300Q09472 2414 aaPredicted RBP9.93□□□□□ -0.82
XRN1-208ENST00000470537 DMXL1Q9Y485 3027 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 IGLV3-22A0A075B6J6 115 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 ESYT2A0FGR8 921 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 URODP06132 367 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 GSPT1P15170 499 aaKnown RBP9.93□□□□□ -0.82
XRN1-208ENST00000470537 VARSP26640 1264 aaKnown RBP9.93□□□□□ -0.82
XRN1-208ENST00000470537 CLCN4P51793 760 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 RCAN1P53805 252 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 AKAP17AQ02040 695 aaKnown RBP9.93□□□□□ -0.82
XRN1-208ENST00000470537 NCBP1Q09161 790 aaKnown RBP9.93□□□□□ -0.82
XRN1-208ENST00000470537 NNTQ13423 1086 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 PTPN14Q15678 1187 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 PRR16Q569H4 304 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 JAKMIP3Q5VZ66 844 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 APOA5Q6Q788 366 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 KIAA2013Q8IYS2 634 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms