RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 GAS2O43903 313 aaKnown RBP12.78□□□□□ -0.36
COMMD2-202ENST00000469896 ALDH2P05091 517 aa12.78□□□□□ -0.36
COMMD2-202ENST00000469896 SPATA31D3P0C874 917 aa12.78□□□□□ -0.36
COMMD2-202ENST00000469896 FNTBP49356 437 aa12.78□□□□□ -0.36
COMMD2-202ENST00000469896 GLUD2P49448 558 aa12.78□□□□□ -0.36
COMMD2-202ENST00000469896 DAB2IPQ5VWQ8 1189 aa12.78□□□□□ -0.36
COMMD2-202ENST00000469896 SPATA31D4Q6ZUB0 917 aa12.78□□□□□ -0.36
COMMD2-202ENST00000469896 URGCPQ8TCY9 931 aa12.78□□□□□ -0.36
COMMD2-202ENST00000469896 FGF13Q92913 245 aa12.78□□□□□ -0.36
COMMD2-202ENST00000469896 SCLT1Q96NL6 688 aa12.78□□□□□ -0.36
COMMD2-202ENST00000469896 FAM193BQ96PV7 902 aaPredicted RBP12.78□□□□□ -0.36
COMMD2-202ENST00000469896 KXD1Q9BQD3 176 aa12.78□□□□□ -0.36
COMMD2-202ENST00000469896 HEBP1Q9NRV9 189 aa12.78□□□□□ -0.36
COMMD2-202ENST00000469896 ZBTB40Q9NUA8 1239 aa12.78□□□□□ -0.36
COMMD2-202ENST00000469896 DNAJB4Q9UDY4 337 aa12.78□□□□□ -0.36
COMMD2-202ENST00000469896 AKT3Q9Y243 479 aa12.78□□□□□ -0.36
COMMD2-202ENST00000469896 PIK3CDO00329 1044 aa12.77□□□□□ -0.37
COMMD2-202ENST00000469896 TMOD1P28289 359 aa12.77□□□□□ -0.37
COMMD2-202ENST00000469896 NLRP11P59045 1033 aaKnown RBP12.77□□□□□ -0.37
COMMD2-202ENST00000469896 SRSF5Q13243 272 aaKnown RBP12.77□□□□□ -0.37
COMMD2-202ENST00000469896 IFIT1BQ5T764 474 aaKnown RBP12.77□□□□□ -0.37
COMMD2-202ENST00000469896 USP17L6PQ6QN14 398 aa12.77□□□□□ -0.37
COMMD2-202ENST00000469896 DNASE1L2Q92874 299 aa12.77□□□□□ -0.37
COMMD2-202ENST00000469896 HERC2P3Q9BVR0 1158 aa12.77□□□□□ -0.37
COMMD2-202ENST00000469896 JADE2Q9NQC1 790 aa12.77□□□□□ -0.37
COMMD2-202ENST00000469896 CHST12Q9NRB3 414 aa12.77□□□□□ -0.37
COMMD2-202ENST00000469896 MAD2L2Q9UI95 211 aa12.77□□□□□ -0.37
COMMD2-202ENST00000469896 FAN1Q9Y2M0 1017 aa12.77□□□□□ -0.37
COMMD2-202ENST00000469896 NEUROG3Q9Y4Z2 214 aa12.77□□□□□ -0.37
COMMD2-202ENST00000469896 ZNF213O14771 459 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 GIPC1O14908 333 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 C22orf31O95567 290 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 PHKA2P46019 1235 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 SATB1Q01826 763 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 CCDC6Q16204 474 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 SH3PXD2AQ5TCZ1 1133 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 HEATR6Q6AI08 1181 aaKnown RBP12.76□□□□□ -0.37
COMMD2-202ENST00000469896 GRASPQ7Z6J2 395 aaPredicted RBP12.76□□□□□ -0.37
COMMD2-202ENST00000469896 PALB2Q86YC2 1186 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 SPEM1Q8N4L4 309 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 ZFRQ96KR1 1074 aaKnown RBP12.76□□□□□ -0.37
COMMD2-202ENST00000469896 TMEM175Q9BSA9 504 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 RIOX1Q9H6W3 641 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 LMAN1LQ9HAT1 526 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 RXFP1Q9HBX9 757 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.76□□□□□ -0.37
COMMD2-202ENST00000469896 WDR70Q9NW82 654 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 SEPT9Q9UHD8 586 aaPredicted RBP12.76□□□□□ -0.37
COMMD2-202ENST00000469896 CEP131Q9UPN4 1083 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 GPSM3Q9Y4H4 160 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 PCDHGA5Q9Y5G8 931 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 UBIAD1Q9Y5Z9 338 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 MYH15Q9Y2K3 1946 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 F5P12259 2224 aa12.76□□□□□ -0.37
COMMD2-202ENST00000469896 LAMA5O15230 3695 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 PALM3A6NDB9 673 aaPredicted RBP12.75□□□□□ -0.37
COMMD2-202ENST00000469896 MAGEB2O15479 319 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 MAP3K7O43318 606 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 TGM5O43548 720 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 ECI2O75521 394 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 ZMYND10O75800 440 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 NFASCO94856 1347 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 EPN2O95208 641 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 CEACAM1P13688 526 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 RAB27AP51159 221 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 CREMQ03060 361 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 MCMDC2Q4G0Z9 681 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 FREM2Q5SZK8 3169 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 TWF2Q6IBS0 349 aaKnown RBP12.75□□□□□ -0.37
COMMD2-202ENST00000469896 PDXDC2PQ6P474 469 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 CKAP2LQ8IYA6 745 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 GLIS3Q8NEA6 775 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 ANKK1Q8NFD2 765 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 LPPQ93052 612 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 TRAIPQ9BWF2 469 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 VPS45Q9NRW7 570 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 KCNH7Q9NS40 1196 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 KANSL3Q9P2N6 904 aa12.75□□□□□ -0.37
COMMD2-202ENST00000469896 XYLBO75191 536 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 OFD1O75665 1012 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 PAPSS2O95340 614 aaPredicted RBP12.74□□□□□ -0.37
COMMD2-202ENST00000469896 TOP3BO95985 862 aaKnown RBP12.74□□□□□ -0.37
COMMD2-202ENST00000469896 HNRNPA1P09651 372 aaKnown RBP eCLIP12.74□□□□□ -0.37
COMMD2-202ENST00000469896 DARSP14868 501 aaKnown RBP12.74□□□□□ -0.37
COMMD2-202ENST00000469896 LONRF3Q496Y0 759 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 LIN9Q5TKA1 542 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 C19orf48Q6RUI8 117 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 CACNA2D4Q7Z3S7 1137 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 PROSER1Q86XN7 944 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 ZNF280BQ86YH2 543 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 ADAM32Q8TC27 787 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 PI4K2BQ8TCG2 481 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 FAM3CQ92520 227 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 PGBD4Q96DM1 585 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 EDEM2Q9BV94 578 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 ZNF302Q9NR11 478 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 MSRB2Q9Y3D2 182 aa12.74□□□□□ -0.37
COMMD2-202ENST00000469896 SPDYE3A6NKU9 549 aa12.73□□□□□ -0.37
COMMD2-202ENST00000469896 ZBTB42B2RXF5 422 aa12.73□□□□□ -0.37
COMMD2-202ENST00000469896 B4E1Z4 1266 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms