RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 OTUD6AQ7L8S5 288 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 ASCL5Q7RTU5 278 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 NECAB1Q8N987 351 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 FLCNQ8NFG4 579 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 MTRQ99707 1265 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 EMILIN2Q9BXX0 1053 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 ZSWIM4Q9H7M6 989 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 SFXN1Q9H9B4 322 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 KCNK12Q9HB15 430 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 MRPL17Q9NRX2 175 aaKnown RBP13.68□□□□□ -0.22
HDAC3-204ENST00000469207 KANSL3Q9P2N6 904 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 CACNG4Q9UBN1 327 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 USTQ9Y2C2 406 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 CFAP54Q96N23 3096 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 CCDC195A0A1B0GUA6 201 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 INO80B-WBP1J3KQ70 363 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 TEX28O15482 410 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 ASAP2O43150 1006 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 B4GALT5O43286 388 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 PFKFB2O60825 505 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 DKC1O60832 514 aaKnown RBP eCLIP13.67□□□□□ -0.22
HDAC3-204ENST00000469207 RFPL2O75678 378 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 SOD2P04179 222 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 NPR3P17342 541 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 AKAP5P24588 427 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 PTENP60484 403 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 KIAA0319Q5VV43 1072 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 CWF19L1Q69YN2 538 aaKnown RBP13.67□□□□□ -0.22
HDAC3-204ENST00000469207 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
HDAC3-204ENST00000469207 POTEGQ6S5H5 508 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 PPFIBP1Q86W92 1011 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 PALB2Q86YC2 1186 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 GLYCTKQ8IVS8 523 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 PIGOQ8TEQ8 1089 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 TCP11Q8WWU5 503 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 RPS6KC1Q96S38 1066 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 EIF2AK1Q9BQI3 630 aaKnown RBP13.67□□□□□ -0.22
HDAC3-204ENST00000469207 TMEM175Q9BSA9 504 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 MFSD1Q9H3U5 465 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 MAN1C1Q9NR34 630 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 KLK14Q9P0G3 267 aa13.67□□□□□ -0.22
HDAC3-204ENST00000469207 ORC3Q9UBD5 711 aaPredicted RBP13.67□□□□□ -0.22
HDAC3-204ENST00000469207 PLXNA3P51805 1871 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 C2orf16Q68DN1 1984 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 TBX3O15119 743 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 ERLIN2O94905 339 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 LARGE1O95461 756 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 EFEMP2O95967 443 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 GCFC2P16383 781 aaKnown RBP13.66□□□□□ -0.22
HDAC3-204ENST00000469207 MBTD1Q05BQ5 628 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 CAPSQ13938 189 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 AMHR2Q16671 573 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 CCDC149Q6ZUS6 474 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 MAEAQ7L5Y9 396 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 EXOC8Q8IYI6 725 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 RNF168Q8IYW5 571 aaPredicted RBP13.66□□□□□ -0.22
HDAC3-204ENST00000469207 GSTCDQ8NEC7 633 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 TNFRSF25Q93038 417 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 ACSF2Q96CM8 615 aaPredicted RBP13.66□□□□□ -0.22
HDAC3-204ENST00000469207 HSD17B14Q9BPX1 270 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 GPR62Q9BZJ7 368 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 CSRNP2Q9H175 543 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 CXCL16Q9H2A7 254 aa13.66□□□□□ -0.22
HDAC3-204ENST00000469207 NXF3Q9H4D5 531 aaKnown RBP13.66□□□□□ -0.22
HDAC3-204ENST00000469207 CNTNAP2Q9UHC6 1331 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 BTBD18B2RXH4 712 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 EPB41L2O43491 1005 aaKnown RBP13.65□□□□□ -0.22
HDAC3-204ENST00000469207 CDKL5O76039 1030 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 BAG4O95429 457 aaKnown RBP13.65□□□□□ -0.22
HDAC3-204ENST00000469207 URODP06132 367 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 ARF4P18085 180 aaPredicted RBP13.65□□□□□ -0.22
HDAC3-204ENST00000469207 RPL17P18621 184 aaKnown RBP13.65□□□□□ -0.22
HDAC3-204ENST00000469207 GLRA2P23416 452 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 ARL2P36404 184 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 TXKP42681 527 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 DSC1Q08554 894 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 TDGQ13569 410 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 ME3Q16798 604 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 NOTUMQ6P988 496 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 OTOP3Q7RTS5 596 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 FAM177A1Q8N128 213 aaPredicted RBP13.65□□□□□ -0.22
HDAC3-204ENST00000469207 RSPH1Q8WYR4 309 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 MYADMQ96S97 322 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 HERC2P3Q9BVR0 1158 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 GPRC5CQ9NQ84 441 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 PCDHA12Q9UN75 941 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 USP20Q9Y2K6 914 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 PPME1Q9Y570 386 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 CACNA1HO95180 2353 aa13.65□□□□□ -0.22
HDAC3-204ENST00000469207 STK36Q9NRP7 1315 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 CARNS1A5YM72 827 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 TTLL13PA6NNM8 815 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 INPPL1O15357 1258 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 GAS2O43903 313 aaKnown RBP13.64□□□□□ -0.23
HDAC3-204ENST00000469207 NPTXRO95502 500 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 CFHP08603 1231 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 XBP1P17861 261 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 GBP2P32456 591 aaPredicted RBP13.64□□□□□ -0.23
HDAC3-204ENST00000469207 KRT2P35908 639 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms