RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 NLRP4Q96MN2 994 aa15.2■□□□□ 0.02
RPP40-204ENST00000468105 HERC2P3Q9BVR0 1158 aa15.2■□□□□ 0.02
RPP40-204ENST00000468105 EMILIN2Q9BXX0 1053 aa15.2■□□□□ 0.02
RPP40-204ENST00000468105 RXFP1Q9HBX9 757 aa15.2■□□□□ 0.02
RPP40-204ENST00000468105 AGPAT5Q9NUQ2 364 aa15.2■□□□□ 0.02
RPP40-204ENST00000468105 CACNG4Q9UBN1 327 aa15.2■□□□□ 0.02
RPP40-204ENST00000468105 TPCN1Q9ULQ1 816 aa15.2■□□□□ 0.02
RPP40-204ENST00000468105 NID2Q14112 1375 aa15.2■□□□□ 0.02
RPP40-204ENST00000468105 MTCL1Q9Y4B5 1905 aaKnown RBP15.19■□□□□ 0.02
RPP40-204ENST00000468105 MAP1BP46821 2468 aaKnown RBP15.19■□□□□ 0.02
RPP40-204ENST00000468105 CHD8Q9HCK8 2581 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 EML1O00423 815 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 TDP2O95551 362 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 LAMP2P13473 410 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 RPL17P18621 184 aaKnown RBP15.19■□□□□ 0.02
RPP40-204ENST00000468105 NPEPPSP55786 919 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 NTHL1P78549 312 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 PUM1Q14671 1186 aaKnown RBP eCLIP15.19■□□□□ 0.02
RPP40-204ENST00000468105 NTRK3Q16288 839 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 PHLDB3Q6NSJ2 640 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 LILRA6Q6PI73 481 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 SYNE3Q6ZMZ3 975 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 CATSPER4Q7RTX7 472 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 PALB2Q86YC2 1186 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 C1orf210Q8IVY1 113 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 SMG7Q92540 1137 aaKnown RBP15.19■□□□□ 0.02
RPP40-204ENST00000468105 FGF14Q92915 247 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 TMX3Q96JJ7 454 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 RIT2Q99578 217 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 EIF2AQ9BY44 585 aaKnown RBP15.19■□□□□ 0.02
RPP40-204ENST00000468105 NT5C3AQ9H0P0 336 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 RSAD1Q9HA92 442 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 ARHGEF3Q9NR81 526 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 MRPL17Q9NRX2 175 aaKnown RBP15.19■□□□□ 0.02
RPP40-204ENST00000468105 FAN1Q9Y2M0 1017 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 HES2Q9Y543 173 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 NUMBLQ9Y6R0 609 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 MYH15Q9Y2K3 1946 aa15.19■□□□□ 0.02
RPP40-204ENST00000468105 PATJQ8NI35 1801 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 NOTCH4Q99466 2003 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 SPDYE4A6NLX3 237 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 GAS7O60861 476 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 ALDH2P05091 517 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 SFPQP23246 707 aaKnown RBP eCLIP15.18■□□□□ 0.02
RPP40-204ENST00000468105 GPC5P78333 572 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 CUL4AQ13619 759 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 BMS1Q14692 1282 aaKnown RBP15.18■□□□□ 0.02
RPP40-204ENST00000468105 ME3Q16798 604 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 XKR3Q5GH77 459 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 LRCH2Q5VUJ6 765 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 PARM1Q6UWI2 310 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 GLYCTKQ8IVS8 523 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 ZNF710Q8N1W2 664 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 RUBCNQ92622 972 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 ZFP42Q96MM3 310 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 TMEM175Q9BSA9 504 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 RHOBTB2Q9BYZ6 727 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 GPR62Q9BZJ7 368 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 GLT8D2Q9H1C3 349 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 SEMA4AQ9H3S1 761 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 CHST7Q9NS84 486 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 BMP2KQ9NSY1 1161 aaPredicted RBP15.18■□□□□ 0.02
RPP40-204ENST00000468105 VPS54Q9P1Q0 977 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 SIT1Q9Y3P8 196 aa15.18■□□□□ 0.02
RPP40-204ENST00000468105 SHISA7A6NL88 538 aa15.17■□□□□ 0.02
RPP40-204ENST00000468105 TGM5O43548 720 aa15.17■□□□□ 0.02
RPP40-204ENST00000468105 PFKFB2O60825 505 aa15.17■□□□□ 0.02
RPP40-204ENST00000468105 TGM1P22735 817 aa15.17■□□□□ 0.02
RPP40-204ENST00000468105 PDIA3P30101 505 aaKnown RBP15.17■□□□□ 0.02
RPP40-204ENST00000468105 DSC1Q08554 894 aa15.17■□□□□ 0.02
RPP40-204ENST00000468105 DCLRE1AQ6PJP8 1040 aa15.17■□□□□ 0.02
RPP40-204ENST00000468105 GET4Q7L5D6 327 aaPredicted RBP15.17■□□□□ 0.02
RPP40-204ENST00000468105 ZNF410Q86VK4 478 aa15.17■□□□□ 0.02
RPP40-204ENST00000468105 GSTCDQ8NEC7 633 aa15.17■□□□□ 0.02
RPP40-204ENST00000468105 PJA1Q8NG27 643 aa15.17■□□□□ 0.02
RPP40-204ENST00000468105 TMEM143Q96AN5 459 aa15.17■□□□□ 0.02
RPP40-204ENST00000468105 GAD1Q99259 594 aa15.17■□□□□ 0.02
RPP40-204ENST00000468105 TEKT3Q9BXF9 490 aa15.17■□□□□ 0.02
RPP40-204ENST00000468105 C6orf50Q9HD87 102 aa15.17■□□□□ 0.02
RPP40-204ENST00000468105 USP24Q9UPU5 2620 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 DDX11L8A8MPP1 907 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 ZBTB39O15060 712 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 PRPF3O43395 683 aaKnown RBP15.16■□□□□ 0.02
RPP40-204ENST00000468105 LARGE1O95461 756 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 GLUD1P00367 558 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 CD72P21854 359 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 OR1G1P47890 313 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 JAK3P52333 1124 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 STARD6P59095 220 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 DSG1Q02413 1049 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 SNW1Q13573 536 aaKnown RBP15.16■□□□□ 0.02
RPP40-204ENST00000468105 NPY5RQ15761 445 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 MIER3Q7Z3K6 550 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 ETNPPLQ8TBG4 499 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 PRPF31Q8WWY3 499 aaKnown RBP15.16■□□□□ 0.02
RPP40-204ENST00000468105 GTF3C6Q969F1 213 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 IPO9Q96P70 1041 aaKnown RBP15.16■□□□□ 0.02
RPP40-204ENST00000468105 CXCL16Q9H2A7 254 aa15.16■□□□□ 0.02
RPP40-204ENST00000468105 SLKQ9H2G2 1235 aaPredicted RBP15.16■□□□□ 0.02
RPP40-204ENST00000468105 SLC2A4RGQ9NR83 387 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms