RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 J3QKU1 62 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 ANP32CO43423 234 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 ZMYND10O75800 440 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 TRIM16O95361 564 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 CHRNB1P11230 501 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 EIF4BP23588 611 aaKnown RBP13.3□□□□□ -0.28
VPS26A-204ENST00000467852 HOXA6P31267 233 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 GLUD2P49448 558 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 SLC26A2P50443 739 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 NTHL1P78549 312 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 GAS6Q14393 721 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 ZNF484Q5JVG2 852 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 ZMYM1Q5SVZ6 1142 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 MFSD6Q6ZSS7 791 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 CCDC86Q9H6F5 360 aaKnown RBP13.3□□□□□ -0.28
VPS26A-204ENST00000467852 BRD9Q9H8M2 597 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 JPH1Q9HDC5 661 aaPredicted RBP13.3□□□□□ -0.28
VPS26A-204ENST00000467852 SLC9A2Q9UBY0 812 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 COL1A2P08123 1366 aa13.3□□□□□ -0.28
VPS26A-204ENST00000467852 FOXP2O15409 715 aa13.29□□□□□ -0.28
VPS26A-204ENST00000467852 C1QL1O75973 258 aa13.29□□□□□ -0.28
VPS26A-204ENST00000467852 PCP11498 1178 aaKnown RBP13.29□□□□□ -0.28
VPS26A-204ENST00000467852 SKIP12755 728 aa13.29□□□□□ -0.28
VPS26A-204ENST00000467852 LRRC32Q14392 662 aa13.29□□□□□ -0.28
VPS26A-204ENST00000467852 ALX1Q15699 326 aa13.29□□□□□ -0.28
VPS26A-204ENST00000467852 METTL13Q8N6R0 699 aa13.29□□□□□ -0.28
VPS26A-204ENST00000467852 SMARCC2Q8TAQ2 1214 aa13.29□□□□□ -0.28
VPS26A-204ENST00000467852 MTMR8Q96EF0 704 aa13.29□□□□□ -0.28
VPS26A-204ENST00000467852 GPATCH3Q96I76 525 aa13.29□□□□□ -0.28
VPS26A-204ENST00000467852 TMEM175Q9BSA9 504 aa13.29□□□□□ -0.28
VPS26A-204ENST00000467852 PLA2G2FQ9BZM2 168 aa13.29□□□□□ -0.28
VPS26A-204ENST00000467852 PIEZO2Q9H5I5 2752 aa13.29□□□□□ -0.28
VPS26A-204ENST00000467852 APC2O95996 2303 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 MAFGO15525 162 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 CAVIN2O95810 425 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 HNRNPA1P09651 372 aaKnown RBP eCLIP13.28□□□□□ -0.28
VPS26A-204ENST00000467852 PHKA2P46019 1235 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 NLRP11P59045 1033 aaKnown RBP13.28□□□□□ -0.28
VPS26A-204ENST00000467852 PTGDRQ13258 359 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 MTMR1Q13613 665 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 UAP1L1Q3KQV9 507 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 LONRF3Q496Y0 759 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 TAS1R1Q7RTX1 841 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 IQCA1Q86XH1 822 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 ZNF280BQ86YH2 543 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 HOMER1Q86YM7 354 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 ZNF710Q8N1W2 664 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 ITFG1Q8TB96 612 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 URGCPQ8TCY9 931 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 ESR2Q92731 530 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 IRF7Q92985 503 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 CUL5Q93034 780 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 LPPQ93052 612 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 ZC3H10Q96K80 434 aaKnown RBP13.28□□□□□ -0.28
VPS26A-204ENST00000467852 POLIQ9UNA4 740 aa13.28□□□□□ -0.28
VPS26A-204ENST00000467852 WDR81Q562E7 1941 aa13.27□□□□□ -0.28
VPS26A-204ENST00000467852 NUP205Q92621 2012 aa13.27□□□□□ -0.28
VPS26A-204ENST00000467852 CELSR3Q9NYQ7 3312 aa13.27□□□□□ -0.28
VPS26A-204ENST00000467852 CACNA1EQ15878 2313 aa13.27□□□□□ -0.28
VPS26A-204ENST00000467852 LNP1A1A4G5 178 aa13.27□□□□□ -0.29
VPS26A-204ENST00000467852 KLRF2D3W0D1 207 aa13.27□□□□□ -0.29
VPS26A-204ENST00000467852 NRP1O14786 923 aa13.27□□□□□ -0.29
VPS26A-204ENST00000467852 XYLBO75191 536 aa13.27□□□□□ -0.29
VPS26A-204ENST00000467852 OFD1O75665 1012 aa13.27□□□□□ -0.29
VPS26A-204ENST00000467852 DSG1Q02413 1049 aa13.27□□□□□ -0.29
VPS26A-204ENST00000467852 LCE2DQ5TA82 110 aaPredicted RBP13.27□□□□□ -0.29
VPS26A-204ENST00000467852 LILRA6Q6PI73 481 aa13.27□□□□□ -0.29
VPS26A-204ENST00000467852 GLYCTKQ8IVS8 523 aa13.27□□□□□ -0.29
VPS26A-204ENST00000467852 ELSPBP1Q96BH3 223 aa13.27□□□□□ -0.29
VPS26A-204ENST00000467852 LRRCC1Q9C099 1032 aa13.27□□□□□ -0.29
VPS26A-204ENST00000467852 CHST12Q9NRB3 414 aa13.27□□□□□ -0.29
VPS26A-204ENST00000467852 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.27□□□□□ -0.29
VPS26A-204ENST00000467852 AKT3Q9Y243 479 aa13.27□□□□□ -0.29
VPS26A-204ENST00000467852 PIAS3Q9Y6X2 628 aa13.27□□□□□ -0.29
VPS26A-204ENST00000467852 AKAP3O75969 853 aa13.26□□□□□ -0.29
VPS26A-204ENST00000467852 FGAP02671 866 aa13.26□□□□□ -0.29
VPS26A-204ENST00000467852 ACTR2P61160 394 aa13.26□□□□□ -0.29
VPS26A-204ENST00000467852 SIM1P81133 766 aaPredicted RBP13.26□□□□□ -0.29
VPS26A-204ENST00000467852 CREB5Q02930 508 aa13.26□□□□□ -0.29
VPS26A-204ENST00000467852 PPM1LQ5SGD2 360 aa13.26□□□□□ -0.29
VPS26A-204ENST00000467852 LIN9Q5TKA1 542 aa13.26□□□□□ -0.29
VPS26A-204ENST00000467852 VPS53Q5VIR6 699 aa13.26□□□□□ -0.29
VPS26A-204ENST00000467852 NPAS3Q8IXF0 933 aa13.26□□□□□ -0.29
VPS26A-204ENST00000467852 STAG2Q8N3U4 1231 aa13.26□□□□□ -0.29
VPS26A-204ENST00000467852 CHCHD4Q8N4Q1 142 aa13.26□□□□□ -0.29
VPS26A-204ENST00000467852 PDCD7Q8N8D1 485 aaKnown RBP13.26□□□□□ -0.29
VPS26A-204ENST00000467852 MAP7D2Q96T17 732 aa13.26□□□□□ -0.29
VPS26A-204ENST00000467852 TRMT61BQ9BVS5 477 aaKnown RBP13.26□□□□□ -0.29
VPS26A-204ENST00000467852 KANSL3Q9P2N6 904 aa13.26□□□□□ -0.29
VPS26A-204ENST00000467852 KCNH3Q9ULD8 1083 aa13.26□□□□□ -0.29
VPS26A-204ENST00000467852 MYH9P35579 1960 aaKnown RBP13.25□□□□□ -0.29
VPS26A-204ENST00000467852 CCDC163A0A0D9SF12 145 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 KHNYNO15037 678 aaKnown RBP13.25□□□□□ -0.29
VPS26A-204ENST00000467852 B4GALT3O60512 393 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 DDHD2O94830 711 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 ITGB5P18084 799 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 CCNE1P24864 410 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 FAM160B1Q5W0V3 765 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 TWF2Q6IBS0 349 aaKnown RBP13.25□□□□□ -0.29
VPS26A-204ENST00000467852 TANGO2Q6ICL3 276 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms