RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 ITGA4P13612 1032 aa16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 HOXB8P17481 243 aaPredicted RBP16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 AKAP5P24588 427 aa16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 MLH1P40692 756 aa16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 POU5F1BQ06416 359 aa16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 TFDP1Q14186 410 aa16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 SAFBQ15424 915 aaKnown RBP eCLIP16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 NOTUMQ6P988 496 aa16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 COLGALT2Q8IYK4 626 aa16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 GSTCDQ8NEC7 633 aa16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 URGCPQ8TCY9 931 aa16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 APOL6Q9BWW8 343 aa16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 POLD4Q9HCU8 107 aa16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 USP20Q9Y2K6 914 aa16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 PRG3Q9Y2Y8 225 aaPredicted RBP16.4■□□□□ 0.22
ATPAF2-204ENST00000467560 EIF5BO60841 1220 aaKnown RBP16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 EDN1P05305 212 aa16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 OR52Z1P0C646 297 aa16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 TOB1P50616 345 aaPredicted RBP16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 SCNN1GP51170 649 aa16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 ZXDAP98168 799 aa16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 DSC1Q08554 894 aa16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 TTC38Q5R3I4 469 aa16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 RARS2Q5T160 578 aaKnown RBP16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 NOSTRINQ8IVI9 506 aa16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 TMEM175Q9BSA9 504 aa16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 POLR3CQ9BUI4 534 aaPredicted RBP16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 NFKBIZQ9BYH8 718 aa16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 CXCL16Q9H2A7 254 aa16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 ADAM7Q9H2U9 754 aa16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 POMKQ9H5K3 350 aa16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 TUFT1Q9NNX1 390 aa16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 DBR1Q9UK59 544 aaKnown RBP16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 FAN1Q9Y2M0 1017 aa16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 ARIH1Q9Y4X5 557 aaPredicted RBP16.39■□□□□ 0.21
ATPAF2-204ENST00000467560 A0A1B0GUA9 196 aa16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 NPTXRO95502 500 aa16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 EFEMP2O95967 443 aa16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 ALDH2P05091 517 aa16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 CNPP09543 421 aaKnown RBP16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 AXLP30530 894 aa16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 RBM25P49756 843 aaKnown RBP16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 PCBP1Q15365 356 aaKnown RBP eCLIP16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 TRIM67Q6ZTA4 783 aa16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 RABGGTAQ92696 567 aa16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 CCDC51Q96ER9 411 aa16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 ZSCAN31Q96LW9 406 aaPredicted RBP16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 CCDC43Q96MW1 224 aaKnown RBP16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 KLHL5Q96PQ7 755 aa16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 KLK14Q9P0G3 267 aa16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 KANSL3Q9P2N6 904 aa16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 CACNG4Q9UBN1 327 aa16.38■□□□□ 0.21
ATPAF2-204ENST00000467560 LRRIQ4A6NIV6 560 aa16.37■□□□□ 0.21
ATPAF2-204ENST00000467560 C2CD4DB7Z1M9 353 aa16.37■□□□□ 0.21
ATPAF2-204ENST00000467560 RPA1P27694 616 aa16.37■□□□□ 0.21
ATPAF2-204ENST00000467560 OR1G1P47890 313 aa16.37■□□□□ 0.21
ATPAF2-204ENST00000467560 CDCA2Q69YH5 1023 aaPredicted RBP16.37■□□□□ 0.21
ATPAF2-204ENST00000467560 PADI6Q6TGC4 694 aa16.37■□□□□ 0.21
ATPAF2-204ENST00000467560 CNNM3Q8NE01 707 aa16.37■□□□□ 0.21
ATPAF2-204ENST00000467560 B3GALT6Q96L58 329 aa16.37■□□□□ 0.21
ATPAF2-204ENST00000467560 FAM193BQ96PV7 902 aaPredicted RBP16.37■□□□□ 0.21
ATPAF2-204ENST00000467560 NACC1Q96RE7 527 aa16.37■□□□□ 0.21
ATPAF2-204ENST00000467560 FZD8Q9H461 694 aa16.37■□□□□ 0.21
ATPAF2-204ENST00000467560 UBN1Q9NPG3 1134 aa16.37■□□□□ 0.21
ATPAF2-204ENST00000467560 TSHZ2Q9NRE2 1034 aa16.37■□□□□ 0.21
ATPAF2-204ENST00000467560 SH2B1Q9NRF2 756 aaPredicted RBP16.37■□□□□ 0.21
ATPAF2-204ENST00000467560 TMEM221A6NGB7 291 aa16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 M0R296 226 aa16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 C2CD2LO14523 706 aa16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 CD2BP2O95400 341 aaKnown RBP16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 CYP11B2P19099 503 aa16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 U2AF2P26368 475 aaKnown RBP eCLIP16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 CLCN4P51793 760 aa16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 HMGN5P82970 282 aaKnown RBP16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 ITIH3Q06033 890 aa16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 IL17AQ16552 155 aa16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 TPRNQ4KMQ1 711 aa16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 SLC27A1Q6PCB7 646 aa16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 TMC5Q6UXY8 1006 aa16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 RNF168Q8IYW5 571 aaPredicted RBP16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 FAM184AQ8NB25 1140 aa16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 KIFC3Q9BVG8 833 aa16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 SMOC2Q9H3U7 446 aa16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 PCDHB6Q9Y5E3 794 aa16.36■□□□□ 0.21
ATPAF2-204ENST00000467560 PP2D1A8MPX8 630 aa16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 SOD2P04179 222 aa16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 FXR2P51116 673 aaKnown RBP eCLIP16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 NCBP1Q09161 790 aaKnown RBP16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 ORC2Q13416 577 aaPredicted RBP16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 PTPN21Q16825 1174 aa16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 KIAA0319Q5VV43 1072 aa16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 CES5AQ6NT32 575 aa16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 MCPH1Q8NEM0 835 aa16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 ASIC4Q96FT7 647 aa16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 FBXL18Q96ME1 805 aa16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 PAAF1Q9BRP4 392 aa16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 HERC2P3Q9BVR0 1158 aa16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 CCDC113Q9H0I3 377 aa16.35■□□□□ 0.21
ATPAF2-204ENST00000467560 PDZD7Q9H5P4 517 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms