RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 KYAT1Q16773 422 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 VPS53Q5VIR6 699 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 ANKS3Q6ZW76 656 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.39□□□□□ -1.39
CXXC4-202ENST00000466963 TRIM50Q86XT4 487 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 COLGALT2Q8IYK4 626 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 STK11IPQ8N1F8 1099 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 SPDYE1Q8NFV5 336 aaPredicted RBP6.39□□□□□ -1.39
CXXC4-202ENST00000466963 HELQQ8TDG4 1101 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 GPR152Q8TDT2 470 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 GAB3Q8WWW8 586 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 FAM20AQ96MK3 541 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 C2orf40Q9H1Z8 148 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 SLC32A1Q9H598 525 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 SEMA4GQ9NTN9 838 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 FAM217BQ9NTX9 383 aaPredicted RBP6.39□□□□□ -1.39
CXXC4-202ENST00000466963 FAM170BA6NMN3 283 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 TAF4O00268 1085 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 LYPLA2O95372 231 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 SLC11A1P49279 550 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 NLRP11P59045 1033 aaKnown RBP6.39□□□□□ -1.39
CXXC4-202ENST00000466963 ORC2Q13416 577 aaPredicted RBP6.39□□□□□ -1.39
CXXC4-202ENST00000466963 ZNF687Q8N1G0 1237 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 STAG2Q8N3U4 1231 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 IGDCC4Q8TDY8 1250 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 SLC5A5Q92911 643 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 ZNF577Q9BSK1 485 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 MKI67P46013 3256 aaKnown RBP6.38□□□□□ -1.39
CXXC4-202ENST00000466963 CHD9Q3L8U1 2897 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 SYN3O14994 580 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 CHADO15335 359 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 CYTH3O43739 400 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 PTPN2P17706 415 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 IGBP1P78318 339 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 LMAN2Q12907 356 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 ZNF423Q2M1K9 1284 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 TSGA10IPQ3SY00 556 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 ARHGAP29Q52LW3 1261 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 TWF2Q6IBS0 349 aaKnown RBP6.38□□□□□ -1.39
CXXC4-202ENST00000466963 CKAP2LQ8IYA6 745 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 ACDQ96AP0 544 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 ORC3Q9UBD5 711 aaPredicted RBP6.38□□□□□ -1.39
CXXC4-202ENST00000466963 MTMR7Q9Y216 660 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 MYH15Q9Y2K3 1946 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 N4BP3O15049 544 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 DHX15O43143 795 aaKnown RBP6.38□□□□□ -1.39
CXXC4-202ENST00000466963 PI15O43692 258 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 SMARCA5O60264 1052 aaPredicted RBP6.38□□□□□ -1.39
CXXC4-202ENST00000466963 ATP9AO75110 1047 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 ASGR2P07307 311 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 FGFR1P11362 822 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 RPL17P18621 184 aaKnown RBP6.38□□□□□ -1.39
CXXC4-202ENST00000466963 METAP2P50579 478 aaKnown RBP eCLIP6.38□□□□□ -1.39
CXXC4-202ENST00000466963 PDE6CP51160 858 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 PSMC5P62195 406 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 DCAF4L1Q3SXM0 396 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 PLA2G2CQ5R387 149 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 PPP4R3AQ6IN85 833 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 CATSPER4Q7RTX7 472 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 MB21D2Q8IYB1 491 aaPredicted RBP6.38□□□□□ -1.39
CXXC4-202ENST00000466963 NLRP7Q8WX94 980 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 PSPC1Q8WXF1 523 aaKnown RBP6.38□□□□□ -1.39
CXXC4-202ENST00000466963 OSMRQ99650 979 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 ZMYND12Q9H0C1 365 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 SLC38A7Q9NVC3 462 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 RTEL1Q9NZ71 1219 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 EBF1Q9UH73 591 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 PCDHB2Q9Y5E7 798 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 R4GN57 208 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 C2orf16Q68DN1 1984 aa6.38□□□□□ -1.39
CXXC4-202ENST00000466963 CFHP08603 1231 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 MARK3P27448 753 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 RAP1GAPP47736 663 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 POU5F1Q01860 360 aaKnown RBP6.37□□□□□ -1.39
CXXC4-202ENST00000466963 SIM2Q14190 667 aaPredicted RBP6.37□□□□□ -1.39
CXXC4-202ENST00000466963 PREPLQ4J6C6 727 aaPredicted RBP6.37□□□□□ -1.39
CXXC4-202ENST00000466963 HOMER1Q86YM7 354 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 DAGLBQ8NCG7 672 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 KCNV2Q8TDN2 545 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 SLC7A3Q8WY07 619 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 SCLT1Q96NL6 688 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 CSRNP2Q9H175 543 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 ANKEF1Q9NU02 776 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 ADAM28Q9UKQ2 775 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 SLC12A7Q9Y666 1083 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 NUMBLQ9Y6R0 609 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 COL6A3P12111 3177 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 IGLV3-22A0A075B6J6 115 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 SH2B2O14492 632 aaPredicted RBP6.37□□□□□ -1.39
CXXC4-202ENST00000466963 RIOK3O14730 519 aaKnown RBP6.37□□□□□ -1.39
CXXC4-202ENST00000466963 NRP1O14786 923 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 ZC3H11AO75152 810 aaKnown RBP eCLIP6.37□□□□□ -1.39
CXXC4-202ENST00000466963 TUSC3Q13454 348 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 UNQ6494/PRO21346Q6UXR6 183 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 TMC5Q6UXY8 1006 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 TCEAL8Q8IYN2 117 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 FANCBQ8NB91 859 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 CEP76Q8TAP6 659 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 C2orf15Q8WU43 125 aaKnown RBP6.37□□□□□ -1.39
CXXC4-202ENST00000466963 GPKOWQ92917 476 aaPredicted RBP eCLIP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms