RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 ABI1Q8IZP0 508 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 SMG8Q8ND04 991 aaKnown RBP13.62□□□□□ -0.23
CHPF2-202ENST00000465601 HELQQ8TDG4 1101 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 PGBD4Q96DM1 585 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 GUCD1Q96NT3 240 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 CASD1Q96PB1 797 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 TGS1Q96RS0 853 aaKnown RBP13.62□□□□□ -0.23
CHPF2-202ENST00000465601 C17orf80Q9BSJ5 609 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 TRIM6Q9C030 488 aaPredicted RBP13.62□□□□□ -0.23
CHPF2-202ENST00000465601 TMEM117Q9H0C3 514 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 RNF39Q9H2S5 420 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 TNMDQ9H2S6 317 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 PDZD7Q9H5P4 517 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 HPSEQ9Y251 543 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 HES2Q9Y543 173 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 IPPQ9Y573 584 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 MRPL42Q9Y6G3 142 aaKnown RBP13.62□□□□□ -0.23
CHPF2-202ENST00000465601 PHLPP2Q6ZVD8 1323 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 EPOPA6NHQ4 379 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 K7ENM7 598 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 N4BP3O15049 544 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 ITGA4P13612 1032 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 CASP1P29466 404 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 SYKP43405 635 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 AFMP43652 599 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 NCKAP1LP55160 1127 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 AMPD3Q01432 767 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 STRN3Q13033 797 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 HERC4Q5GLZ8 1057 aaPredicted RBP13.61□□□□□ -0.23
CHPF2-202ENST00000465601 AGMOQ6ZNB7 445 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 GRAMD1CQ8IYS0 662 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 CEP57L1Q8IYX8 460 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 CNNM3Q8NE01 707 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 MRPS27Q92552 414 aaKnown RBP13.61□□□□□ -0.23
CHPF2-202ENST00000465601 IPO9Q96P70 1041 aaKnown RBP13.61□□□□□ -0.23
CHPF2-202ENST00000465601 FIZ1Q96SL8 496 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 CDX2Q99626 313 aaPredicted RBP13.61□□□□□ -0.23
CHPF2-202ENST00000465601 ACO2Q99798 780 aaKnown RBP13.61□□□□□ -0.23
CHPF2-202ENST00000465601 PYM1Q9BRP8 204 aaKnown RBP13.61□□□□□ -0.23
CHPF2-202ENST00000465601 TARS2Q9BW92 718 aaKnown RBP13.61□□□□□ -0.23
CHPF2-202ENST00000465601 APOL6Q9BWW8 343 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 MRPL4Q9BYD3 311 aaKnown RBP13.61□□□□□ -0.23
CHPF2-202ENST00000465601 LRRC27Q9C0I9 530 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 GOLPH3LQ9H4A5 285 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 TYW1Q9NV66 732 aaKnown RBP13.61□□□□□ -0.23
CHPF2-202ENST00000465601 PANK4Q9NVE7 773 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 TBC1D7Q9P0N9 293 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 HCSTQ9UBK5 93 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 KIAA1671Q9BY89 1806 aa13.61□□□□□ -0.23
CHPF2-202ENST00000465601 FAM237AA0A1B0GTK4 181 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 GOLGA6L4A6NEF3 574 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 H0YCG3 227 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 CITO14578 2027 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 ACTN4O43707 911 aaKnown RBP13.6□□□□□ -0.23
CHPF2-202ENST00000465601 OFD1O75665 1012 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 SLFN14P0C7P3 912 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 LINC00271P0C7V0 271 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 GAP43P17677 238 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 RALGAPA2Q2PPJ7 1873 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 EPC2Q52LR7 807 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 SPOUT1Q5T280 376 aaKnown RBP13.6□□□□□ -0.23
CHPF2-202ENST00000465601 LRRC55Q6ZSA7 311 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 TMEM192Q8IY95 271 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 MYLIPQ8WY64 445 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 CLP1Q92989 425 aaKnown RBP13.6□□□□□ -0.23
CHPF2-202ENST00000465601 ZBTB45Q96K62 511 aaPredicted RBP13.6□□□□□ -0.23
CHPF2-202ENST00000465601 C7orf25Q9BPX7 421 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 ADPGKQ9BRR6 497 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 TRIM9Q9C026 710 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 BLZF1Q9H2G9 400 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 NXF3Q9H4D5 531 aaKnown RBP13.6□□□□□ -0.23
CHPF2-202ENST00000465601 MAGEF1Q9HAY2 307 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 BRWD1Q9NSI6 2320 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 INPP5FQ9Y2H2 1132 aa13.6□□□□□ -0.23
CHPF2-202ENST00000465601 TDRD15B5MCY1 1934 aaKnown RBP13.6□□□□□ -0.23
CHPF2-202ENST00000465601 FRMD3A2A2Y4 597 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 AKAP5P24588 427 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 CTNNB1P35222 781 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 BMPR1AP36894 532 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 AFF1P51825 1210 aaKnown RBP13.59□□□□□ -0.23
CHPF2-202ENST00000465601 ASIC1P78348 528 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 CUL4BQ13620 913 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 ZC2HC1CQ53FD0 456 aaPredicted RBP13.59□□□□□ -0.23
CHPF2-202ENST00000465601 GLB1LQ6UWU2 654 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 ZNF720Q7Z2F6 126 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 ZBTB33Q86T24 672 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 CCDC65Q8IXS2 484 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 FBXO22Q8NEZ5 403 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 BICD1Q96G01 975 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 PAGE5Q96GU1 130 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 SAMD11Q96NU1 681 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 TCHPQ9BT92 498 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 CWH43Q9H720 699 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 MRPL44Q9H9J2 332 aaKnown RBP13.59□□□□□ -0.23
CHPF2-202ENST00000465601 RSAD1Q9HA92 442 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 PTPRHQ9HD43 1115 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 SNTG2Q9NY99 539 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 SEL1LQ9UBV2 794 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 PARP2Q9UGN5 583 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 USP25Q9UHP3 1055 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms