RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 ATF2P15336 505 aa7.18□□□□□ -1.26
NUP188-202ENST00000464729 BMP7P18075 431 aa7.18□□□□□ -1.26
NUP188-202ENST00000464729 HOXC12P31275 282 aa7.18□□□□□ -1.26
NUP188-202ENST00000464729 WDR43Q15061 677 aaKnown RBP eCLIP7.18□□□□□ -1.26
NUP188-202ENST00000464729 INF2Q27J81 1249 aa7.18□□□□□ -1.26
NUP188-202ENST00000464729 TAF7LQ5H9L4 462 aa7.18□□□□□ -1.26
NUP188-202ENST00000464729 PRRT2Q7Z6L0 340 aaPredicted RBP7.18□□□□□ -1.26
NUP188-202ENST00000464729 PLEKHO2Q8TD55 490 aa7.18□□□□□ -1.26
NUP188-202ENST00000464729 SMCR8Q8TEV9 937 aaPredicted RBP7.18□□□□□ -1.26
NUP188-202ENST00000464729 DNAAF4Q8WXU2 420 aa7.18□□□□□ -1.26
NUP188-202ENST00000464729 CDX2Q99626 313 aaPredicted RBP7.18□□□□□ -1.26
NUP188-202ENST00000464729 NUDT5Q9UKK9 219 aa7.18□□□□□ -1.26
NUP188-202ENST00000464729 GJD2Q9UKL4 321 aa7.18□□□□□ -1.26
NUP188-202ENST00000464729 OGDHLQ9ULD0 1010 aa7.18□□□□□ -1.26
NUP188-202ENST00000464729 AFG3L2Q9Y4W6 797 aa7.18□□□□□ -1.26
NUP188-202ENST00000464729 APAF1O14727 1248 aa7.17□□□□□ -1.26
NUP188-202ENST00000464729 HMGCRP04035 888 aa7.17□□□□□ -1.26
NUP188-202ENST00000464729 FUCA1P04066 466 aa7.17□□□□□ -1.26
NUP188-202ENST00000464729 CAPNS1P04632 268 aa7.17□□□□□ -1.26
NUP188-202ENST00000464729 NCAM1P13591 858 aa7.17□□□□□ -1.26
NUP188-202ENST00000464729 HOXA5P20719 270 aa7.17□□□□□ -1.26
NUP188-202ENST00000464729 CHAF1AQ13111 956 aaPredicted RBP7.17□□□□□ -1.26
NUP188-202ENST00000464729 SLC9A5Q14940 896 aa7.17□□□□□ -1.26
NUP188-202ENST00000464729 CAVIN4Q5BKX8 364 aa7.17□□□□□ -1.26
NUP188-202ENST00000464729 E4F1Q66K89 784 aaPredicted RBP7.17□□□□□ -1.26
NUP188-202ENST00000464729 GADL1Q6ZQY3 521 aa7.17□□□□□ -1.26
NUP188-202ENST00000464729 ANKRD13CQ8N6S4 541 aa7.17□□□□□ -1.26
NUP188-202ENST00000464729 USP33Q8TEY7 942 aa7.17□□□□□ -1.26
NUP188-202ENST00000464729 HNRNPLLQ8WVV9 542 aaKnown RBP7.17□□□□□ -1.26
NUP188-202ENST00000464729 ALG3Q92685 438 aa7.17□□□□□ -1.26
NUP188-202ENST00000464729 EPN3Q9H201 632 aa7.17□□□□□ -1.26
NUP188-202ENST00000464729 LRP2BPQ9P2M1 347 aa7.17□□□□□ -1.26
NUP188-202ENST00000464729 CENPFP49454 3210 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 ZSWIM8A7E2V4 1837 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 ARNTLO00327 626 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 PMLP29590 882 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 TCP10Q12799 353 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 TESK1Q15569 626 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 SLC10A6Q3KNW5 377 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 IQCEQ6IPM2 695 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 CDC42EP5Q6NZY7 148 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 LILRA6Q6PI73 481 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 EEPD1Q7L9B9 569 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 CCDC103Q8IW40 242 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 SCYL3Q8IZE3 742 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 LINC01356Q8N9X3 169 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 KREMEN2Q8NCW0 462 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 MAFAQ8NHW3 353 aaPredicted RBP7.16□□□□□ -1.26
NUP188-202ENST00000464729 CCDC140Q96MF4 163 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 LBHD1Q9BQE6 289 aaPredicted RBP7.16□□□□□ -1.26
NUP188-202ENST00000464729 KRTAP4-7Q9BYR0 210 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 PUS3Q9BZE2 481 aaKnown RBP7.16□□□□□ -1.26
NUP188-202ENST00000464729 ZCCHC4Q9H5U6 513 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 MARCH2Q9P0N8 246 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 MAST3O60307 1309 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 BRCA2P51587 3418 aa7.16□□□□□ -1.26
NUP188-202ENST00000464729 CUL9Q8IWT3 2517 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 CTNND1O60716 968 aaKnown RBP7.15□□□□□ -1.26
NUP188-202ENST00000464729 PLA2G1BP04054 148 aaKnown RBP7.15□□□□□ -1.26
NUP188-202ENST00000464729 NTRK1P04629 796 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 SNRPB2P08579 225 aaKnown RBP7.15□□□□□ -1.26
NUP188-202ENST00000464729 COL6A1P12109 1028 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 MC3RP41968 323 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 GCLCP48506 637 aaPredicted RBP7.15□□□□□ -1.26
NUP188-202ENST00000464729 GFRA1P56159 465 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 SF1Q15637 639 aaKnown RBP7.15□□□□□ -1.26
NUP188-202ENST00000464729 FAM110CQ1W6H9 321 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 VMACQ2NL98 169 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 TWISTNBQ3B726 338 aaPredicted RBP7.15□□□□□ -1.26
NUP188-202ENST00000464729 EPHA10Q5JZY3 1008 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 BEND3Q5T5X7 828 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 ACBD5Q5T8D3 534 aaPredicted RBP7.15□□□□□ -1.26
NUP188-202ENST00000464729 ANKS3Q6ZW76 656 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 B3GNT8Q7Z7M8 397 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 Q8N1Y9 231 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 CELF2-AS1Q8N7Q2 184 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 TP53I13Q8NBR0 393 aaPredicted RBP7.15□□□□□ -1.26
NUP188-202ENST00000464729 CPA5Q8WXQ8 436 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 BCAS3Q9H6U6 928 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 TMEFF2Q9UIK5 374 aaPredicted RBP7.15□□□□□ -1.26
NUP188-202ENST00000464729 LRRFIP2Q9Y608 721 aaKnown RBP7.15□□□□□ -1.26
NUP188-202ENST00000464729 PFASO15067 1338 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 MROH5Q6ZUA9 1318 aa7.15□□□□□ -1.26
NUP188-202ENST00000464729 RPAP1Q9BWH6 1393 aaPredicted RBP7.15□□□□□ -1.26
NUP188-202ENST00000464729 ECM29Q5VYK3 1845 aa7.15□□□□□ -1.27
NUP188-202ENST00000464729 FFAR3O14843 346 aa7.14□□□□□ -1.27
NUP188-202ENST00000464729 KLF4O43474 513 aa7.14□□□□□ -1.27
NUP188-202ENST00000464729 CPP00450 1065 aa7.14□□□□□ -1.27
NUP188-202ENST00000464729 CYP2B6P20813 491 aa7.14□□□□□ -1.27
NUP188-202ENST00000464729 ECI1P42126 302 aa7.14□□□□□ -1.27
NUP188-202ENST00000464729 KCNAB2Q13303 367 aa7.14□□□□□ -1.27
NUP188-202ENST00000464729 DDR2Q16832 855 aa7.14□□□□□ -1.27
NUP188-202ENST00000464729 LRRC26Q2I0M4 334 aa7.14□□□□□ -1.27
NUP188-202ENST00000464729 VWA3BQ502W6 1294 aa7.14□□□□□ -1.27
NUP188-202ENST00000464729 MAP3K21Q5TCX8 1036 aa7.14□□□□□ -1.27
NUP188-202ENST00000464729 DCP2Q8IU60 420 aaKnown RBP7.14□□□□□ -1.27
NUP188-202ENST00000464729 TEX2Q8IWB9 1127 aa7.14□□□□□ -1.27
NUP188-202ENST00000464729 ZFPM1Q8IX07 1006 aa7.14□□□□□ -1.27
NUP188-202ENST00000464729 WDR66Q8TBY9 1149 aa7.14□□□□□ -1.27
NUP188-202ENST00000464729 FNIP1Q8TF40 1166 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms