RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 CLUL1Q15846 466 aa7.98□□□□□ -1.13
PTCD3-205ENST00000464541 MST1LQ2TV78 715 aa7.98□□□□□ -1.13
PTCD3-205ENST00000464541 ABHD15Q6UXT9 468 aa7.98□□□□□ -1.13
PTCD3-205ENST00000464541 ANKRD35Q8N283 1001 aa7.98□□□□□ -1.13
PTCD3-205ENST00000464541 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.98□□□□□ -1.13
PTCD3-205ENST00000464541 RIN2Q8WYP3 895 aaPredicted RBP7.98□□□□□ -1.13
PTCD3-205ENST00000464541 DVL3Q92997 716 aaPredicted RBP7.98□□□□□ -1.13
PTCD3-205ENST00000464541 ARL8AQ96BM9 186 aa7.98□□□□□ -1.13
PTCD3-205ENST00000464541 ADI1Q9BV57 179 aa7.98□□□□□ -1.13
PTCD3-205ENST00000464541 MCAMP43121 646 aa7.97□□□□□ -1.13
PTCD3-205ENST00000464541 MAMDC4Q6UXC1 1216 aa7.97□□□□□ -1.13
PTCD3-205ENST00000464541 D2HGDHQ8N465 521 aa7.97□□□□□ -1.13
PTCD3-205ENST00000464541 OR5M3Q8NGP4 307 aa7.97□□□□□ -1.13
PTCD3-205ENST00000464541 C8orf49Q96NF6 230 aa7.97□□□□□ -1.13
PTCD3-205ENST00000464541 WWC2-AS2Q96NR7 200 aa7.97□□□□□ -1.13
PTCD3-205ENST00000464541 CEP89Q96ST8 783 aa7.97□□□□□ -1.13
PTCD3-205ENST00000464541 GPRC5DQ9NZD1 345 aa7.97□□□□□ -1.13
PTCD3-205ENST00000464541 NCDNQ9UBB6 729 aa7.97□□□□□ -1.13
PTCD3-205ENST00000464541 ST6GALNAC2Q9UJ37 374 aa7.97□□□□□ -1.13
PTCD3-205ENST00000464541 KRTAP9-7A8MTY7 169 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 FAM171A2A8MVW0 826 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 CYP27B1O15528 508 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 AKR1B10O60218 316 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 PDGFRBP09619 1106 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 WASP42768 502 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 CCT2P78371 535 aaKnown RBP7.96□□□□□ -1.14
PTCD3-205ENST00000464541 ADAM17P78536 824 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 MGAT2Q10469 447 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 FKBP15Q5T1M5 1219 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 PDZD4Q76G19 769 aaPredicted RBP7.96□□□□□ -1.14
PTCD3-205ENST00000464541 JADE3Q92613 823 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 CHMP4CQ96CF2 233 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 IL17RAQ96F46 866 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 KLC2Q9H0B6 622 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 BCO1Q9HAY6 547 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 TESMINQ9Y4I5 508 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 NCANO14594 1321 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 TNKSO95271 1327 aa7.96□□□□□ -1.14
PTCD3-205ENST00000464541 PRRG2O14669 202 aa7.95□□□□□ -1.14
PTCD3-205ENST00000464541 ECHS1P30084 290 aa7.95□□□□□ -1.14
PTCD3-205ENST00000464541 GZMKP49863 264 aa7.95□□□□□ -1.14
PTCD3-205ENST00000464541 MRPL49Q13405 166 aaKnown RBP7.95□□□□□ -1.14
PTCD3-205ENST00000464541 PTPN21Q16825 1174 aa7.95□□□□□ -1.14
PTCD3-205ENST00000464541 Q6ZSN1 163 aa7.95□□□□□ -1.14
PTCD3-205ENST00000464541 APBB1IPQ7Z5R6 666 aaPredicted RBP7.95□□□□□ -1.14
PTCD3-205ENST00000464541 PRRT2Q7Z6L0 340 aaPredicted RBP7.95□□□□□ -1.14
PTCD3-205ENST00000464541 PNMA8AQ86V59 439 aaPredicted RBP7.95□□□□□ -1.14
PTCD3-205ENST00000464541 ANKRD13AQ8IZ07 590 aa7.95□□□□□ -1.14
PTCD3-205ENST00000464541 TMEM176AQ96HP8 235 aa7.95□□□□□ -1.14
PTCD3-205ENST00000464541 ZNF512Q96ME7 567 aaPredicted RBP7.95□□□□□ -1.14
PTCD3-205ENST00000464541 CDC5LQ99459 802 aaKnown RBP7.95□□□□□ -1.14
PTCD3-205ENST00000464541 PDCD2LQ9BRP1 358 aa7.95□□□□□ -1.14
PTCD3-205ENST00000464541 KRTAP3-1Q9BYR8 98 aa7.95□□□□□ -1.14
PTCD3-205ENST00000464541 SAP30BPQ9UHR5 308 aaKnown RBP7.95□□□□□ -1.14
PTCD3-205ENST00000464541 HOXA3O43365 443 aaPredicted RBP7.94□□□□□ -1.14
PTCD3-205ENST00000464541 XPOTO43592 962 aaKnown RBP7.94□□□□□ -1.14
PTCD3-205ENST00000464541 PCDHGA12O60330 932 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 ITGA10O75578 1167 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 IPO13O94829 963 aaKnown RBP7.94□□□□□ -1.14
PTCD3-205ENST00000464541 ENDOD1O94919 500 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 ACO1P21399 889 aaKnown RBP7.94□□□□□ -1.14
PTCD3-205ENST00000464541 CASRP41180 1078 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 SLC16A1P53985 500 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 PPP3CAQ08209 521 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 ACAP2Q15057 778 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 PRKD1Q15139 912 aaPredicted RBP7.94□□□□□ -1.14
PTCD3-205ENST00000464541 PCBP2Q15366 365 aaKnown RBP eCLIP7.94□□□□□ -1.14
PTCD3-205ENST00000464541 LILRA3Q8N6C8 439 aaPredicted RBP7.94□□□□□ -1.14
PTCD3-205ENST00000464541 OR7D4Q8NG98 312 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 STAG1Q8WVM7 1258 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 HOXB13Q92826 284 aaPredicted RBP7.94□□□□□ -1.14
PTCD3-205ENST00000464541 MIEF2Q96C03 454 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 SMAD5Q99717 465 aaKnown RBP7.94□□□□□ -1.14
PTCD3-205ENST00000464541 HECAQ9UBI9 543 aaPredicted RBP7.94□□□□□ -1.14
PTCD3-205ENST00000464541 TRPS1Q9UHF7 1281 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 SH3BP1Q9Y3L3 701 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 PCDHGA9Q9Y5G4 932 aaKnown RBP7.94□□□□□ -1.14
PTCD3-205ENST00000464541 PCDHGA8Q9Y5G5 932 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 PCDHGA7Q9Y5G6 932 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 PCDHGA6Q9Y5G7 932 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 PCDHGA3Q9Y5H0 932 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 PCDHGA2Q9Y5H1 932 aa7.94□□□□□ -1.14
PTCD3-205ENST00000464541 MUSKO15146 869 aa7.93□□□□□ -1.14
PTCD3-205ENST00000464541 NDUFS2O75306 463 aa7.93□□□□□ -1.14
PTCD3-205ENST00000464541 ADRB1P08588 477 aa7.93□□□□□ -1.14
PTCD3-205ENST00000464541 ZNF20P17024 532 aa7.93□□□□□ -1.14
PTCD3-205ENST00000464541 CCND1P24385 295 aa7.93□□□□□ -1.14
PTCD3-205ENST00000464541 RECQLP46063 649 aaPredicted RBP7.93□□□□□ -1.14
PTCD3-205ENST00000464541 NEK2P51955 445 aa7.93□□□□□ -1.14
PTCD3-205ENST00000464541 METTL24Q5JXM2 366 aa7.93□□□□□ -1.14
PTCD3-205ENST00000464541 EFCAB2Q5VUJ9 269 aa7.93□□□□□ -1.14
PTCD3-205ENST00000464541 ADOQ96SZ5 270 aa7.93□□□□□ -1.14
PTCD3-205ENST00000464541 AURKAIP1Q9NWT8 199 aaPredicted RBP7.93□□□□□ -1.14
PTCD3-205ENST00000464541 TSC22D4Q9Y3Q8 395 aa7.93□□□□□ -1.14
PTCD3-205ENST00000464541 MFAP3LO75121 409 aa7.92□□□□□ -1.14
PTCD3-205ENST00000464541 GSPT1P15170 499 aaKnown RBP7.92□□□□□ -1.14
PTCD3-205ENST00000464541 GNAT2P19087 354 aa7.92□□□□□ -1.14
PTCD3-205ENST00000464541 R3HDM1Q15032 1099 aaKnown RBP7.92□□□□□ -1.14
PTCD3-205ENST00000464541 ELAVL1Q15717 326 aaKnown RBP7.92□□□□□ -1.14
PTCD3-205ENST00000464541 TMEM240Q5SV17 173 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms