RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 GIT1Q9Y2X7 761 aa22.79■■□□□ 1.24
PDLIM4-205ENST00000463615 A0A087WWV3 80 aa22.78■■□□□ 1.24
PDLIM4-205ENST00000463615 CYP11B2P19099 503 aa22.78■■□□□ 1.24
PDLIM4-205ENST00000463615 DSC1Q08554 894 aa22.78■■□□□ 1.24
PDLIM4-205ENST00000463615 GNL2Q13823 731 aaKnown RBP22.78■■□□□ 1.24
PDLIM4-205ENST00000463615 TPRNQ4KMQ1 711 aa22.78■■□□□ 1.24
PDLIM4-205ENST00000463615 HAUS3Q68CZ6 603 aa22.78■■□□□ 1.24
PDLIM4-205ENST00000463615 CPB2Q96IY4 423 aa22.78■■□□□ 1.24
PDLIM4-205ENST00000463615 RNF39Q9H2S5 420 aa22.78■■□□□ 1.24
PDLIM4-205ENST00000463615 FZD8Q9H461 694 aa22.78■■□□□ 1.24
PDLIM4-205ENST00000463615 STK24Q9Y6E0 443 aa22.78■■□□□ 1.24
PDLIM4-205ENST00000463615 ARL5CA6NH57 179 aa22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 EFEMP2O95967 443 aa22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 TOB1P50616 345 aaPredicted RBP22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 ITIH3Q06033 890 aa22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 SLC27A1Q6PCB7 646 aa22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 POTEGQ6S5H5 508 aa22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 COLGALT2Q8IYK4 626 aa22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 HACE1Q8IYU2 909 aa22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 IGSF22Q8N9C0 903 aa22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 FAM193BQ96PV7 902 aaPredicted RBP22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 GBP3Q9H0R5 595 aa22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 GPRC5CQ9NQ84 441 aa22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 PRMT7Q9NVM4 692 aaPredicted RBP22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 MUTYHQ9UIF7 546 aa22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 FAN1Q9Y2M0 1017 aa22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 HCN4Q9Y3Q4 1203 aa22.77■■□□□ 1.24
PDLIM4-205ENST00000463615 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.76■■□□□ 1.23
PDLIM4-205ENST00000463615 LAD1O00515 517 aa22.76■■□□□ 1.23
PDLIM4-205ENST00000463615 NRP1O14786 923 aa22.76■■□□□ 1.23
PDLIM4-205ENST00000463615 B4GALT5O43286 388 aa22.76■■□□□ 1.23
PDLIM4-205ENST00000463615 LILRB3O75022 631 aa22.76■■□□□ 1.23
PDLIM4-205ENST00000463615 PTPN14Q15678 1187 aa22.76■■□□□ 1.23
PDLIM4-205ENST00000463615 LLGL2Q6P1M3 1020 aa22.76■■□□□ 1.23
PDLIM4-205ENST00000463615 PADI6Q6TGC4 694 aa22.76■■□□□ 1.23
PDLIM4-205ENST00000463615 SLC22A17Q8WUG5 538 aa22.76■■□□□ 1.23
PDLIM4-205ENST00000463615 GAD1Q99259 594 aa22.76■■□□□ 1.23
PDLIM4-205ENST00000463615 C2orf40Q9H1Z8 148 aa22.76■■□□□ 1.23
PDLIM4-205ENST00000463615 ADAM7Q9H2U9 754 aa22.76■■□□□ 1.23
PDLIM4-205ENST00000463615 DZANK1Q9NVP4 752 aa22.76■■□□□ 1.23
PDLIM4-205ENST00000463615 KIF3AQ9Y496 699 aa22.76■■□□□ 1.23
PDLIM4-205ENST00000463615 ST18O60284 1047 aa22.75■■□□□ 1.23
PDLIM4-205ENST00000463615 POMCP01189 267 aa22.75■■□□□ 1.23
PDLIM4-205ENST00000463615 PPFIBP1Q86W92 1011 aa22.75■■□□□ 1.23
PDLIM4-205ENST00000463615 RNF168Q8IYW5 571 aaPredicted RBP22.75■■□□□ 1.23
PDLIM4-205ENST00000463615 GSTCDQ8NEC7 633 aa22.75■■□□□ 1.23
PDLIM4-205ENST00000463615 EDAQ92838 391 aa22.75■■□□□ 1.23
PDLIM4-205ENST00000463615 NECTIN4Q96NY8 510 aa22.75■■□□□ 1.23
PDLIM4-205ENST00000463615 MARCH5Q9NX47 278 aa22.75■■□□□ 1.23
PDLIM4-205ENST00000463615 LRWD1Q9UFC0 647 aa22.75■■□□□ 1.23
PDLIM4-205ENST00000463615 HES2Q9Y543 173 aa22.75■■□□□ 1.23
PDLIM4-205ENST00000463615 ARHGEF35A5YM69 484 aa22.74■■□□□ 1.23
PDLIM4-205ENST00000463615 LRRIQ4A6NIV6 560 aa22.74■■□□□ 1.23
PDLIM4-205ENST00000463615 MLH1P40692 756 aa22.74■■□□□ 1.23
PDLIM4-205ENST00000463615 PRPHP41219 470 aa22.74■■□□□ 1.23
PDLIM4-205ENST00000463615 ZBTB8OSQ8IWT0 167 aa22.74■■□□□ 1.23
PDLIM4-205ENST00000463615 AUTS2Q8WXX7 1259 aa22.74■■□□□ 1.23
PDLIM4-205ENST00000463615 TRIM6Q9C030 488 aaPredicted RBP22.74■■□□□ 1.23
PDLIM4-205ENST00000463615 NXF3Q9H4D5 531 aaKnown RBP22.74■■□□□ 1.23
PDLIM4-205ENST00000463615 MIOSQ9NXC5 875 aa22.74■■□□□ 1.23
PDLIM4-205ENST00000463615 SOD2P04179 222 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 PLA2G5P39877 138 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 NAMPTP43490 491 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 PTGDRQ13258 359 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 NBR1Q14596 966 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 PPP2R5AQ15172 486 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 ECM1Q16610 540 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 CES5AQ6NT32 575 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 MAEAQ7L5Y9 396 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 GPR65Q8IYL9 337 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 BSNDQ8WZ55 320 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 ZFP42Q96MM3 310 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 HERC2P3Q9BVR0 1158 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 RAB34Q9BZG1 259 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 CCDC113Q9H0I3 377 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 PCDHB6Q9Y5E3 794 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 TECTAO75443 2155 aa22.73■■□□□ 1.23
PDLIM4-205ENST00000463615 CCT6AP40227 531 aaKnown RBP22.72■■□□□ 1.23
PDLIM4-205ENST00000463615 MTHFRP42898 656 aa22.72■■□□□ 1.23
PDLIM4-205ENST00000463615 SCNN1GP51170 649 aa22.72■■□□□ 1.23
PDLIM4-205ENST00000463615 BMP8AQ7Z5Y6 402 aa22.72■■□□□ 1.23
PDLIM4-205ENST00000463615 TMX3Q96JJ7 454 aa22.72■■□□□ 1.23
PDLIM4-205ENST00000463615 RPGRIP1Q96KN7 1286 aa22.72■■□□□ 1.23
PDLIM4-205ENST00000463615 KLHL5Q96PQ7 755 aa22.72■■□□□ 1.23
PDLIM4-205ENST00000463615 EMILIN2Q9BXX0 1053 aa22.72■■□□□ 1.23
PDLIM4-205ENST00000463615 SSX2IPQ9Y2D8 614 aa22.72■■□□□ 1.23
PDLIM4-205ENST00000463615 ACKR2O00590 384 aa22.71■■□□□ 1.23
PDLIM4-205ENST00000463615 NPTXRO95502 500 aa22.71■■□□□ 1.23
PDLIM4-205ENST00000463615 C1RP00736 705 aa22.71■■□□□ 1.23
PDLIM4-205ENST00000463615 EPCAMP16422 314 aa22.71■■□□□ 1.23
PDLIM4-205ENST00000463615 MCM2P49736 904 aa22.71■■□□□ 1.23
PDLIM4-205ENST00000463615 GRIK3Q13003 919 aa22.71■■□□□ 1.23
PDLIM4-205ENST00000463615 MAPK6Q16659 721 aa22.71■■□□□ 1.23
PDLIM4-205ENST00000463615 TMEM87AQ8NBN3 555 aa22.71■■□□□ 1.23
PDLIM4-205ENST00000463615 KIFAP3Q92845 792 aa22.71■■□□□ 1.23
PDLIM4-205ENST00000463615 RIPOR3Q96MK2 946 aa22.71■■□□□ 1.23
PDLIM4-205ENST00000463615 BHMT2Q9H2M3 363 aa22.71■■□□□ 1.23
PDLIM4-205ENST00000463615 MRPL17Q9NRX2 175 aaKnown RBP22.71■■□□□ 1.23
PDLIM4-205ENST00000463615 N4BP3O15049 544 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms