RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 PPP4R3AQ6IN85 833 aa5.67□□□□□ -1.5
VRK2-208ENST00000463222 APOA5Q6Q788 366 aa5.67□□□□□ -1.5
VRK2-208ENST00000463222 TTC7BQ86TV6 843 aa5.67□□□□□ -1.5
VRK2-208ENST00000463222 SH2D3CQ8N5H7 860 aa5.67□□□□□ -1.5
VRK2-208ENST00000463222 FLAD1Q8NFF5 587 aa5.67□□□□□ -1.5
VRK2-208ENST00000463222 SMARCC2Q8TAQ2 1214 aa5.67□□□□□ -1.5
VRK2-208ENST00000463222 PGBD4Q96DM1 585 aa5.67□□□□□ -1.5
VRK2-208ENST00000463222 CDK5RAP3Q96JB5 506 aa5.67□□□□□ -1.5
VRK2-208ENST00000463222 CLPTM1LQ96KA5 538 aa5.67□□□□□ -1.5
VRK2-208ENST00000463222 SGCZQ96LD1 299 aa5.67□□□□□ -1.5
VRK2-208ENST00000463222 RIPOR3Q96MK2 946 aa5.67□□□□□ -1.5
VRK2-208ENST00000463222 NUP62CLQ9H1M0 184 aa5.67□□□□□ -1.5
VRK2-208ENST00000463222 CROTQ9UKG9 612 aa5.67□□□□□ -1.5
VRK2-208ENST00000463222 CDC42EP3Q9UKI2 254 aa5.67□□□□□ -1.5
VRK2-208ENST00000463222 A0A088AWK7 358 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 H3BUI4 141 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 BIN1O00499 593 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 PRAMEF4O60810 478 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 LY86O95711 162 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 CYP2C8P10632 490 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 ATF2P15336 505 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 FBLN1P23142 703 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 RTP5Q14D33 572 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 UBE3CQ15386 1083 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 KHDC1Q4VXA5 237 aaKnown RBP5.66□□□□□ -1.5
VRK2-208ENST00000463222 GRAMD4Q6IC98 578 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 FAM180AQ6UWF9 173 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 DPP8Q6V1X1 898 aaPredicted RBP5.66□□□□□ -1.5
VRK2-208ENST00000463222 BCL6BQ8N143 479 aaPredicted RBP5.66□□□□□ -1.5
VRK2-208ENST00000463222 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.66□□□□□ -1.5
VRK2-208ENST00000463222 NSUN6Q8TEA1 469 aaKnown RBP5.66□□□□□ -1.5
VRK2-208ENST00000463222 CPA5Q8WXQ8 436 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 DMRTA2Q96SC8 542 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 TMEM209Q96SK2 561 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 VRK1Q99986 396 aaPredicted RBP5.66□□□□□ -1.5
VRK2-208ENST00000463222 C14orf93Q9H972 538 aaKnown RBP5.66□□□□□ -1.5
VRK2-208ENST00000463222 ZMAT3Q9HA38 289 aaKnown RBP5.66□□□□□ -1.5
VRK2-208ENST00000463222 ATP6V0A4Q9HBG4 840 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 POLR3BQ9NW08 1133 aaPredicted RBP5.66□□□□□ -1.5
VRK2-208ENST00000463222 SAE1Q9UBE0 346 aaPredicted RBP5.66□□□□□ -1.5
VRK2-208ENST00000463222 CORO2BQ9UQ03 480 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 RPTORQ8N122 1335 aa5.66□□□□□ -1.5
VRK2-208ENST00000463222 A0A1W2PR48 441 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 RHPN2P1A8MT19 583 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 FAM171A2A8MVW0 826 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 KPNA5O15131 536 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 NBNO60934 754 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 MYF5P13349 255 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 HALP42357 657 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 SLC6A9P48067 706 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 TM4SF4P48230 202 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 HK3P52790 923 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 RAB1AP62820 205 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 GPSM2P81274 684 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 SRSF3P84103 164 aaKnown RBP5.65□□□□□ -1.5
VRK2-208ENST00000463222 NOGQ13253 232 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 ADAM9Q13443 819 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 FGL2Q14314 439 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 HSP90AB4PQ58FF6 505 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 LCE4AQ5TA78 99 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 THEMIS2Q5TEJ8 643 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 Q6ZVL8 140 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 OTOP2Q7RTS6 562 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 HEATR3Q7Z4Q2 680 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 ZNF605Q86T29 641 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 KRT78Q8N1N4 520 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 C3orf20Q8ND61 904 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 PPP1R14CQ8TAE6 165 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 CCHCR1Q8TD31 782 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 POF1BQ8WVV4 589 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 GORASP1Q9BQQ3 440 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 C22orf23Q9BZE7 217 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 HAPLN2Q9GZV7 340 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 ZNF552Q9H707 407 aaPredicted RBP5.65□□□□□ -1.5
VRK2-208ENST00000463222 KCND1Q9NSA2 647 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 TDP1Q9NUW8 608 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.65□□□□□ -1.5
VRK2-208ENST00000463222 TPCN1Q9ULQ1 816 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 SIK3Q9Y2K2 1263 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 SNX13Q9Y5W8 968 aa5.65□□□□□ -1.5
VRK2-208ENST00000463222 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.65□□□□□ -1.5
VRK2-208ENST00000463222 A0A0G2JNJ9 132 aa5.64□□□□□ -1.51
VRK2-208ENST00000463222 SLC16A6O15403 523 aa5.64□□□□□ -1.51
VRK2-208ENST00000463222 PIP5K1CO60331 668 aa5.64□□□□□ -1.51
VRK2-208ENST00000463222 RPLP2P05387 115 aaKnown RBP5.64□□□□□ -1.51
VRK2-208ENST00000463222 LTA4HP09960 611 aaKnown RBP5.64□□□□□ -1.51
VRK2-208ENST00000463222 STAT5BP51692 787 aa5.64□□□□□ -1.51
VRK2-208ENST00000463222 ITGA1P56199 1179 aa5.64□□□□□ -1.51
VRK2-208ENST00000463222 PER3P56645 1201 aa5.64□□□□□ -1.51
VRK2-208ENST00000463222 NKX6-1P78426 367 aaPredicted RBP5.64□□□□□ -1.51
VRK2-208ENST00000463222 MAP3K12Q12852 859 aa5.64□□□□□ -1.51
VRK2-208ENST00000463222 TARDBPQ13148 414 aaKnown RBP eCLIP5.64□□□□□ -1.51
VRK2-208ENST00000463222 TRIM14Q14142 442 aa5.64□□□□□ -1.51
VRK2-208ENST00000463222 PLS1Q14651 629 aa5.64□□□□□ -1.51
VRK2-208ENST00000463222 CXXC5Q7LFL8 322 aaKnown RBP5.64□□□□□ -1.51
VRK2-208ENST00000463222 LDHDQ86WU2 507 aa5.64□□□□□ -1.51
VRK2-208ENST00000463222 IRF2BP1Q8IU81 584 aa5.64□□□□□ -1.51
VRK2-208ENST00000463222 FAM9AQ8IZU1 332 aaPredicted RBP5.64□□□□□ -1.51
VRK2-208ENST00000463222 ANKRD42Q8N9B4 389 aa5.64□□□□□ -1.51
VRK2-208ENST00000463222 PIK3C3Q8NEB9 887 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms