RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 WNT7BP56706 349 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 CETN1Q12798 172 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 GPR162Q16538 588 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 HSDL1Q3SXM5 330 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 H2AFVQ71UI9 128 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 VPS36Q86VN1 386 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 PALB2Q86YC2 1186 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 GPD1LQ8N335 351 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 CAGE1Q8TC20 777 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 AFAP1L1Q8TED9 768 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 KCNN1Q92952 543 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 FAM84AQ96KN4 292 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 RPGRIP1Q96KN7 1286 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 KREMEN1Q96MU8 473 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 MMP19Q99542 508 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 PACSIN2Q9UNF0 486 aaPredicted RBP11.02□□□□□ -0.65
MSH5-211ENST00000463144 SCN4AP35499 1836 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 ATP8B3O60423 1300 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 CYP2C8P10632 490 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 PLA2G4AP47712 749 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 DRP2Q13474 957 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 LONRF2Q1L5Z9 754 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 BEND6Q5SZJ8 279 aaPredicted RBP11.01□□□□□ -0.65
MSH5-211ENST00000463144 LRRC57Q8N9N7 239 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 SLC20A1Q8WUM9 679 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 HNRNPLLQ8WVV9 542 aaKnown RBP11.01□□□□□ -0.65
MSH5-211ENST00000463144 ELMO3Q96BJ8 720 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 MS4A14Q96JA4 679 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 ZBTB45Q96K62 511 aaPredicted RBP11.01□□□□□ -0.65
MSH5-211ENST00000463144 GPR20Q99678 358 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 FAM213AQ9BRX8 229 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 FUT8Q9BYC5 575 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 GOLPH3Q9H4A6 298 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 ARFGAP3Q9NP61 516 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 RNF216Q9NWF9 866 aaPredicted RBP11.01□□□□□ -0.65
MSH5-211ENST00000463144 TAS2R14Q9NYV8 317 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 INTUQ9ULD6 942 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 STYXL1Q9Y6J8 313 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 FAM170AA1A519 330 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 DCAF8L1A6NGE4 600 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 TULP1O00294 542 aaPredicted RBP11.01□□□□□ -0.65
MSH5-211ENST00000463144 NAMPTP43490 491 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 ERVK-9P63128 1117 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 KCTD2Q14681 263 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 KRT39Q6A163 491 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 WDR93Q6P2C0 686 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 CCDC62Q6P9F0 684 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 SV2AQ7L0J3 742 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 SPATA4Q8NEY3 305 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 HELQQ8TDG4 1101 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 TAS1R2Q8TE23 839 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 SLC7A3Q8WY07 619 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 ZNF516Q92618 1163 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 BICD1Q96G01 975 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 AGPAT1Q99943 283 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 EFCC1Q9HA90 598 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 TMEM8AQ9HCN3 771 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 ABCB6Q9NP58 842 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 NRBP2Q9NSY0 501 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
MSH5-211ENST00000463144 LRRIQ4A6NIV6 560 aa11□□□□□ -0.65
MSH5-211ENST00000463144 TMCO5BA8MYB1 307 aa11□□□□□ -0.65
MSH5-211ENST00000463144 H0YCG3 227 aa11□□□□□ -0.65
MSH5-211ENST00000463144 ATP8B1O43520 1251 aa11□□□□□ -0.65
MSH5-211ENST00000463144 MAFO75444 373 aaPredicted RBP11□□□□□ -0.65
MSH5-211ENST00000463144 TNFAIP3P21580 790 aa11□□□□□ -0.65
MSH5-211ENST00000463144 COPB2P35606 906 aa11□□□□□ -0.65
MSH5-211ENST00000463144 RFC5P40937 340 aa11□□□□□ -0.65
MSH5-211ENST00000463144 NOP2P46087 812 aaKnown RBP11□□□□□ -0.65
MSH5-211ENST00000463144 LIG4P49917 911 aa11□□□□□ -0.65
MSH5-211ENST00000463144 GPC3P51654 580 aa11□□□□□ -0.65
MSH5-211ENST00000463144 ITIH3Q06033 890 aa11□□□□□ -0.65
MSH5-211ENST00000463144 SNAPC2Q13487 334 aa11□□□□□ -0.65
MSH5-211ENST00000463144 PRPF4BQ13523 1007 aaKnown RBP11□□□□□ -0.65
MSH5-211ENST00000463144 CAPSQ13938 189 aa11□□□□□ -0.65
MSH5-211ENST00000463144 CELF3Q5SZQ8 465 aaKnown RBP11□□□□□ -0.65
MSH5-211ENST00000463144 FAM160B1Q5W0V3 765 aa11□□□□□ -0.65
MSH5-211ENST00000463144 CRELD2Q6UXH1 353 aaPredicted RBP11□□□□□ -0.65
MSH5-211ENST00000463144 TRIM50Q86XT4 487 aa11□□□□□ -0.65
MSH5-211ENST00000463144 FBXO16Q8IX29 292 aaPredicted RBP11□□□□□ -0.65
MSH5-211ENST00000463144 MMGT1Q8N4V1 131 aa11□□□□□ -0.65
MSH5-211ENST00000463144 TPCN2Q8NHX9 752 aa11□□□□□ -0.65
MSH5-211ENST00000463144 MORC4Q8TE76 937 aa11□□□□□ -0.65
MSH5-211ENST00000463144 COPS5Q92905 334 aa11□□□□□ -0.65
MSH5-211ENST00000463144 SLC10A4Q96EP9 437 aa11□□□□□ -0.65
MSH5-211ENST00000463144 MROH8Q9H579 483 aa11□□□□□ -0.65
MSH5-211ENST00000463144 SUGCTQ9HAC7 445 aa11□□□□□ -0.65
MSH5-211ENST00000463144 PDGFCQ9NRA1 345 aa11□□□□□ -0.65
MSH5-211ENST00000463144 A0A0A6YYK5 440 aaPredicted RBP11□□□□□ -0.65
MSH5-211ENST00000463144 TTLL13PA6NNM8 815 aa11□□□□□ -0.65
MSH5-211ENST00000463144 ZBTB42B2RXF5 422 aa11□□□□□ -0.65
MSH5-211ENST00000463144 EXTL3O43909 919 aa11□□□□□ -0.65
MSH5-211ENST00000463144 LGR5O75473 907 aa11□□□□□ -0.65
MSH5-211ENST00000463144 SGPL1O95470 568 aa11□□□□□ -0.65
MSH5-211ENST00000463144 PIGRP01833 764 aa11□□□□□ -0.65
MSH5-211ENST00000463144 CCDC172P0C7W6 258 aa11□□□□□ -0.65
MSH5-211ENST00000463144 ZBTB48P10074 688 aaPredicted RBP11□□□□□ -0.65
MSH5-211ENST00000463144 DLATP10515 647 aaKnown RBP11□□□□□ -0.65
MSH5-211ENST00000463144 DNA2P51530 1060 aa11□□□□□ -0.65
MSH5-211ENST00000463144 NLRP11P59045 1033 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms