RNA–Protein interactions for RNA: ENST00000462429.1

VPS41-210, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 3

Gene VPS41, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-210ENST00000462429 OAZ3Q9UMX2 235 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 LAMTOR5O43504 91 aa5.43□□□□□ -1.54
VPS41-210ENST00000462429 GASTP01350 101 aa5.43□□□□□ -1.54
VPS41-210ENST00000462429 RPLP2P05387 115 aaKnown RBP5.43□□□□□ -1.54
VPS41-210ENST00000462429 CR2P20023 1033 aa5.43□□□□□ -1.54
VPS41-210ENST00000462429 CNR2P34972 360 aa5.43□□□□□ -1.54
VPS41-210ENST00000462429 PER3P56645 1201 aa5.43□□□□□ -1.54
VPS41-210ENST00000462429 MST1LQ2TV78 715 aa5.43□□□□□ -1.54
VPS41-210ENST00000462429 HSP90AB2PQ58FF8 381 aa5.43□□□□□ -1.54
VPS41-210ENST00000462429 SLFN13Q68D06 897 aa5.43□□□□□ -1.54
VPS41-210ENST00000462429 FRMD5Q7Z6J6 570 aa5.43□□□□□ -1.54
VPS41-210ENST00000462429 TPH2Q8IWU9 490 aa5.43□□□□□ -1.54
VPS41-210ENST00000462429 CFHR4Q92496 578 aa5.43□□□□□ -1.54
VPS41-210ENST00000462429 TSR2Q969E8 191 aaKnown RBP5.43□□□□□ -1.54
VPS41-210ENST00000462429 AIFM3Q96NN9 605 aa5.43□□□□□ -1.54
VPS41-210ENST00000462429 GPRC5DQ9NZD1 345 aa5.43□□□□□ -1.54
VPS41-210ENST00000462429 RCAN3Q9UKA8 241 aa5.43□□□□□ -1.54
VPS41-210ENST00000462429 NOB1Q9ULX3 412 aaKnown RBP5.43□□□□□ -1.54
VPS41-210ENST00000462429 GOLGA6CA6NDK9 693 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 GOLGA6BA6NDN3 693 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 CCDC154A6NI56 674 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 HTRA2O43464 458 aaPredicted RBP5.42□□□□□ -1.54
VPS41-210ENST00000462429 CDC14BO60729 498 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 POU2F2P09086 479 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 GOLGA6DP0CG33 693 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 HSPA6P17066 643 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 CRHR1P34998 444 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 MLC1Q15049 377 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 IFIT1BQ5T764 474 aaKnown RBP5.42□□□□□ -1.54
VPS41-210ENST00000462429 PPP4R3AQ6IN85 833 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 ZDHHC14Q8IZN3 488 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 CMTM4Q8IZR5 234 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 MAGEB6Q8N7X4 407 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 SHCBP1Q8NEM2 672 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.42□□□□□ -1.54
VPS41-210ENST00000462429 DPF2Q92785 391 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 CCDC136Q96JN2 1154 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 LRRC37BQ96QE4 947 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 UHRF1Q96T88 793 aaPredicted RBP5.42□□□□□ -1.54
VPS41-210ENST00000462429 GPHA2Q96T91 129 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 NELFAQ9H3P2 528 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 MANSC1Q9H8J5 431 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 BCO1Q9HAY6 547 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 GOLGA2P5Q9HBQ8 144 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 NMRK2Q9NPI5 230 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 GOLGA6AQ9NYA3 693 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 NCDNQ9UBB6 729 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 SERPINB13Q9UIV8 391 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 IPPQ9Y573 584 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 ZNF536O15090 1300 aa5.42□□□□□ -1.54
VPS41-210ENST00000462429 A0A1W2PRX2 142 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 ITGA10O75578 1167 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 OFD1O75665 1012 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 PDCP20941 246 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 RPS19P39019 145 aaKnown RBP5.41□□□□□ -1.54
VPS41-210ENST00000462429 NPEPPSP55786 919 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 ADAM8P78325 824 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 RIN1Q13671 783 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 ACAP1Q15027 740 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 MINDY4Q4G0A6 757 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 UBXN11Q5T124 520 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 PDZD4Q76G19 769 aaPredicted RBP5.41□□□□□ -1.54
VPS41-210ENST00000462429 OR7D4Q8NG98 312 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 OR5M3Q8NGP4 307 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 HOXB13Q92826 284 aaPredicted RBP5.41□□□□□ -1.54
VPS41-210ENST00000462429 CLIP3Q96DZ5 547 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 CYFIP2Q96F07 1278 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 CDC5LQ99459 802 aaKnown RBP5.41□□□□□ -1.54
VPS41-210ENST00000462429 DPYSL5Q9BPU6 564 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 XYLT2Q9H1B5 865 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 PARD6AQ9NPB6 346 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 IL23AQ9NPF7 189 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 TRPS1Q9UHF7 1281 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 LIMCH1Q9UPQ0 1083 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 CFAP20Q9Y6A4 193 aaKnown RBP5.41□□□□□ -1.54
VPS41-210ENST00000462429 DUSP10Q9Y6W6 482 aa5.41□□□□□ -1.54
VPS41-210ENST00000462429 UBE2QL1A1L167 161 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 NPEPPSL1A6NEC2 478 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 OTOL1A6NHN0 477 aaPredicted RBP5.4□□□□□ -1.54
VPS41-210ENST00000462429 MATN2O00339 956 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 PLATP00750 562 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 ATF3P18847 181 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 EDNRBP24530 442 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 SEPT2Q15019 361 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 C3orf36Q3SXR2 165 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 ZFYVE27Q5T4F4 411 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 CCDC181Q5TID7 509 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 Q6ZVL8 140 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 USP45Q70EL2 814 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 CATIPQ7Z7H3 387 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 RHOT1Q8IXI2 618 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 PQLC1Q8N2U9 271 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 GIMAP8Q8ND71 665 aaPredicted RBP5.4□□□□□ -1.54
VPS41-210ENST00000462429 OR2I1PQ8NGU4 316 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 RELTQ969Z4 430 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 ARL8AQ96BM9 186 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 C8orf48Q96LL4 319 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 LRGUKQ96M69 825 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 MAP3K14Q99558 947 aa5.4□□□□□ -1.54
VPS41-210ENST00000462429 TCF25Q9BQ70 676 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms