RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 ZNF711Q9Y462 761 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 EMSYQ7Z589 1322 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 ZNF532Q9HCE3 1301 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 ABHD14A-ACY1A0A1B0GW23 586 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 A0A1W2PRG0 241 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 ETS2P15036 469 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 MDH1P40925 334 aaKnown RBP6.35□□□□□ -1.39
CLK1-207ENST00000461981 SERPINB4P48594 390 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 PSMD7P51665 324 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 USP11P51784 963 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 DYNLL1P63167 89 aaKnown RBP6.35□□□□□ -1.39
CLK1-207ENST00000461981 KCNJ2P63252 427 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 STK3Q13188 491 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 NCAPHQ15003 741 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 DUSP28Q4G0W2 176 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 ITIH6Q6UXX5 1313 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 FSIP1Q8NA03 581 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 ERMNQ8TAM6 284 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 CARD9Q9H257 536 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 MCM9Q9NXL9 1143 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.35□□□□□ -1.39
CLK1-207ENST00000461981 PRELID1Q9Y255 219 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 TMA7Q9Y2S6 64 aaKnown RBP6.35□□□□□ -1.39
CLK1-207ENST00000461981 SH3GLB1Q9Y371 365 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 HCN4Q9Y3Q4 1203 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 KIF28PB7ZC32 967 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 CBFA2T2O43439 604 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 GTPBP6O43824 516 aaPredicted RBP6.34□□□□□ -1.39
CLK1-207ENST00000461981 USO1O60763 962 aaKnown RBP6.34□□□□□ -1.39
CLK1-207ENST00000461981 GNA14O95837 355 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 PENKP01210 267 aaPredicted RBP6.34□□□□□ -1.39
CLK1-207ENST00000461981 PYGMP11217 842 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 MDM2Q00987 491 aaPredicted RBP6.34□□□□□ -1.39
CLK1-207ENST00000461981 PDE4BQ07343 736 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 MKRN4PQ13434 485 aaPredicted RBP6.34□□□□□ -1.39
CLK1-207ENST00000461981 TIGD5Q53EQ6 642 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 SLC44A4Q53GD3 710 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 DUS1LQ6P1R4 473 aaKnown RBP6.34□□□□□ -1.39
CLK1-207ENST00000461981 XRRA1Q6P2D8 792 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 CCNI2Q6ZMN8 369 aaPredicted RBP6.34□□□□□ -1.39
CLK1-207ENST00000461981 KDM7AQ6ZMT4 941 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 TC2NQ8N9U0 490 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 KBTBD3Q8NAB2 608 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 CPLX3Q8WVH0 158 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 MRGBPQ9NV56 204 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 GGA2Q9UJY4 613 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 CROTQ9UKG9 612 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 CEP131Q9UPN4 1083 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.34□□□□□ -1.39
CLK1-207ENST00000461981 GMEB1Q9Y692 573 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 KIAA1217Q5T5P2 1943 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 BOLA2-SMG1P6H3BVE0 249 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 ATP9BO43861 1147 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 RB1P06400 928 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 VIMP08670 466 aaKnown RBP6.34□□□□□ -1.39
CLK1-207ENST00000461981 RASA1P20936 1047 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 ME1P48163 572 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 ERVK-21P61565 698 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 GUCY2DQ02846 1103 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 MCL1Q07820 350 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 GJC2Q5T442 439 aaPredicted RBP6.34□□□□□ -1.39
CLK1-207ENST00000461981 CNKSR3Q6P9H4 555 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 ZNF713Q8N859 430 aaPredicted RBP6.34□□□□□ -1.39
CLK1-207ENST00000461981 MYLIPQ8WY64 445 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 CCT6BQ92526 530 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 APBB2Q92870 758 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 TCEANC2Q96MN5 208 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 ZIM3Q96PE6 472 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 USP28Q96RU2 1077 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 RETREG1Q9H6L5 497 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 TRPV5Q9NQA5 729 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 PFDN4Q9NQP4 134 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 SNRKQ9NRH2 765 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 HEY1Q9Y5J3 304 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 BAZ2AQ9UIF9 1905 aaKnown RBP6.34□□□□□ -1.39
CLK1-207ENST00000461981 ABCB11O95342 1321 aa6.34□□□□□ -1.39
CLK1-207ENST00000461981 PRR33A8MZF0 331 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 ICAM1P05362 532 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 EEF2P13639 858 aaKnown RBP6.34□□□□□ -1.4
CLK1-207ENST00000461981 SYN1P17600 705 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 CCND1P24385 295 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 ALDH5A1P51649 535 aaPredicted RBP6.34□□□□□ -1.4
CLK1-207ENST00000461981 PHEXP78562 749 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 FOXK2Q01167 660 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 KCNA10Q16322 511 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 FAM47AQ5JRC9 791 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 ZNF362Q5T0B9 420 aaPredicted RBP6.34□□□□□ -1.4
CLK1-207ENST00000461981 C6orf183Q5T699 404 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 RAD9BQ6WBX8 426 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 RNF25Q96BH1 459 aaPredicted RBP6.34□□□□□ -1.4
CLK1-207ENST00000461981 ZNF653Q96CK0 615 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 AGBL1Q96MI9 1066 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 STRBPQ96SI9 672 aaKnown RBP6.34□□□□□ -1.4
CLK1-207ENST00000461981 ETNK2Q9NVF9 386 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 MTMR4Q9NYA4 1195 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 TIMM22Q9Y584 194 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 ADGRG1Q9Y653 693 aa6.34□□□□□ -1.4
CLK1-207ENST00000461981 GMNCA6NCL1 334 aa6.33□□□□□ -1.4
CLK1-207ENST00000461981 CETN3O15182 167 aa6.33□□□□□ -1.4
CLK1-207ENST00000461981 TLL1O43897 1013 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms