RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 BRD1O95696 1058 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 PDGFBP01127 241 aaPredicted RBP16.37■□□□□ 0.21
SMPD4-216ENST00000461187 SSBP05455 408 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMPD4-216ENST00000461187 CNPP09543 421 aaKnown RBP16.37■□□□□ 0.21
SMPD4-216ENST00000461187 ITGA4P13612 1032 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 AVPR2P30518 371 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 AXLP30530 894 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 CLCN4P51793 760 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 POU5F1BQ06416 359 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 MTMR3Q13615 1198 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 PCBP1Q15365 356 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMPD4-216ENST00000461187 CALCRLQ16602 461 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 TMC5Q6UXY8 1006 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 CABP7Q86V35 215 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 UBALD2Q8IYN6 164 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 ZDHHC14Q8IZN3 488 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 NSUN7Q8NE18 718 aaKnown RBP16.37■□□□□ 0.21
SMPD4-216ENST00000461187 ASAP3Q8TDY4 903 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 CPB2Q96IY4 423 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 UBN1Q9NPG3 1134 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 ANKEF1Q9NU02 776 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 MARCH5Q9NX47 278 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 DBR1Q9UK59 544 aaKnown RBP16.37■□□□□ 0.21
SMPD4-216ENST00000461187 BTBD18B2RXH4 712 aa16.36■□□□□ 0.21
SMPD4-216ENST00000461187 CAPSQ13938 189 aa16.36■□□□□ 0.21
SMPD4-216ENST00000461187 NOTUMQ6P988 496 aa16.36■□□□□ 0.21
SMPD4-216ENST00000461187 GPR149Q86SP6 731 aa16.36■□□□□ 0.21
SMPD4-216ENST00000461187 COLGALT2Q8IYK4 626 aa16.36■□□□□ 0.21
SMPD4-216ENST00000461187 TDRD5Q8NAT2 981 aaKnown RBP16.36■□□□□ 0.21
SMPD4-216ENST00000461187 CCDC51Q96ER9 411 aa16.36■□□□□ 0.21
SMPD4-216ENST00000461187 EMILIN2Q9BXX0 1053 aa16.36■□□□□ 0.21
SMPD4-216ENST00000461187 SMOC2Q9H3U7 446 aa16.36■□□□□ 0.21
SMPD4-216ENST00000461187 TTC12Q9H892 705 aaPredicted RBP16.36■□□□□ 0.21
SMPD4-216ENST00000461187 SFXN1Q9H9B4 322 aa16.36■□□□□ 0.21
SMPD4-216ENST00000461187 MRPL17Q9NRX2 175 aaKnown RBP16.36■□□□□ 0.21
SMPD4-216ENST00000461187 MIOSQ9NXC5 875 aa16.36■□□□□ 0.21
SMPD4-216ENST00000461187 LIMD1Q9UGP4 676 aa16.36■□□□□ 0.21
SMPD4-216ENST00000461187 USTQ9Y2C2 406 aa16.36■□□□□ 0.21
SMPD4-216ENST00000461187 HES2Q9Y543 173 aa16.36■□□□□ 0.21
SMPD4-216ENST00000461187 MYH15Q9Y2K3 1946 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 ARL5CA6NH57 179 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 INO80B-WBP1J3KQ70 363 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 DGAT1O75907 488 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 EFEMP2O95967 443 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 SOD2P04179 222 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 ASGR2P07307 311 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 KLRC2P26717 231 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 ARL2P36404 184 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 RARRES1P49788 294 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 MBTD1Q05BQ5 628 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 DSC1Q08554 894 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 TFDP1Q14186 410 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 AMHR2Q16671 573 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 TAS1R1Q7RTX1 841 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 RNF168Q8IYW5 571 aaPredicted RBP16.35■□□□□ 0.21
SMPD4-216ENST00000461187 PLCD3Q8N3E9 789 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 MTMR9Q96QG7 549 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 GAD1Q99259 594 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 HERC2P3Q9BVR0 1158 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 CSRNP2Q9H175 543 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 MYO15AQ9UKN7 3530 aa16.35■□□□□ 0.21
SMPD4-216ENST00000461187 VPS13AQ96RL7 3174 aa16.34■□□□□ 0.21
SMPD4-216ENST00000461187 PTPRZ1P23471 2315 aaPredicted RBP16.34■□□□□ 0.21
SMPD4-216ENST00000461187 CFAP54Q96N23 3096 aa16.34■□□□□ 0.21
SMPD4-216ENST00000461187 RIF1Q5UIP0 2472 aaKnown RBP16.34■□□□□ 0.21
SMPD4-216ENST00000461187 A0A087WWV3 80 aa16.34■□□□□ 0.21
SMPD4-216ENST00000461187 NEMFO60524 1076 aa16.34■□□□□ 0.21
SMPD4-216ENST00000461187 JAK2O60674 1132 aa16.34■□□□□ 0.21
SMPD4-216ENST00000461187 ARF4P18085 180 aaPredicted RBP16.34■□□□□ 0.21
SMPD4-216ENST00000461187 GLRA2P23416 452 aa16.34■□□□□ 0.21
SMPD4-216ENST00000461187 MLH1P40692 756 aa16.34■□□□□ 0.21
SMPD4-216ENST00000461187 TXKP42681 527 aa16.34■□□□□ 0.21
SMPD4-216ENST00000461187 OR1G1P47890 313 aa16.34■□□□□ 0.21
SMPD4-216ENST00000461187 DIS3L2Q8IYB7 885 aaKnown RBP16.34■□□□□ 0.21
SMPD4-216ENST00000461187 PIGOQ8TEQ8 1089 aa16.34■□□□□ 0.21
SMPD4-216ENST00000461187 ZFP42Q96MM3 310 aa16.34■□□□□ 0.21
SMPD4-216ENST00000461187 NFKBIZQ9BYH8 718 aa16.34■□□□□ 0.21
SMPD4-216ENST00000461187 PRG3Q9Y2Y8 225 aaPredicted RBP16.34■□□□□ 0.21
SMPD4-216ENST00000461187 FAM186AA6NE01 2351 aa16.34■□□□□ 0.21
SMPD4-216ENST00000461187 F8W810 466 aa16.33■□□□□ 0.2
SMPD4-216ENST00000461187 C2CD2LO14523 706 aa16.33■□□□□ 0.2
SMPD4-216ENST00000461187 B4GALT5O43286 388 aa16.33■□□□□ 0.2
SMPD4-216ENST00000461187 URODP06132 367 aa16.33■□□□□ 0.2
SMPD4-216ENST00000461187 SCNN1GP51170 649 aa16.33■□□□□ 0.2
SMPD4-216ENST00000461187 FOSBP53539 338 aa16.33■□□□□ 0.2
SMPD4-216ENST00000461187 NCBP1Q09161 790 aaKnown RBP16.33■□□□□ 0.2
SMPD4-216ENST00000461187 KIAA0319Q5VV43 1072 aa16.33■□□□□ 0.2
SMPD4-216ENST00000461187 GSTCDQ8NEC7 633 aa16.33■□□□□ 0.2
SMPD4-216ENST00000461187 RPS6KC1Q96S38 1066 aa16.33■□□□□ 0.2
SMPD4-216ENST00000461187 APOL6Q9BWW8 343 aa16.33■□□□□ 0.2
SMPD4-216ENST00000461187 TMEM60Q9H2L4 133 aa16.33■□□□□ 0.2
SMPD4-216ENST00000461187 NXF3Q9H4D5 531 aaKnown RBP16.33■□□□□ 0.2
SMPD4-216ENST00000461187 GIT1Q9Y2X7 761 aa16.33■□□□□ 0.2
SMPD4-216ENST00000461187 ZFHX2Q9C0A1 2572 aaPredicted RBP16.33■□□□□ 0.2
SMPD4-216ENST00000461187 PDCD11Q14690 1871 aaKnown RBP16.33■□□□□ 0.2
SMPD4-216ENST00000461187 NOTCH4Q99466 2003 aa16.33■□□□□ 0.2
SMPD4-216ENST00000461187 POTEMA6NI47 508 aa16.32■□□□□ 0.2
SMPD4-216ENST00000461187 SPDYE4A6NLX3 237 aa16.32■□□□□ 0.2
SMPD4-216ENST00000461187 NEFLP07196 543 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms