RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 PKNOX2Q96KN3 472 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 ZMYND12Q9H0C1 365 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 SLC9A3R1O14745 358 aaPredicted RBP10.72□□□□□ -0.69
EPB41-208ENST00000460378 LAMTOR5O43504 91 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 SYNCRIPO60506 623 aaKnown RBP10.72□□□□□ -0.69
EPB41-208ENST00000460378 HOXB8P17481 243 aaPredicted RBP10.72□□□□□ -0.69
EPB41-208ENST00000460378 TAF6P49848 677 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 PKN1Q16512 942 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 RGL4Q8IZJ4 473 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 BBS5Q8N3I7 341 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 POF1BQ8WVV4 589 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 FAM149B1Q96BN6 582 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 UNC45AQ9H3U1 944 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 RGL1Q9NZL6 768 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 PCDHB6Q9Y5E3 794 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 PCDHB2Q9Y5E7 798 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 CASTOR2A6NHX0 329 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 TTLL13PA6NNM8 815 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 NDUFS2O75306 463 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 IL18RAPO95256 599 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 MBD3O95983 291 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 RBM10P98175 930 aaKnown RBP10.72□□□□□ -0.69
EPB41-208ENST00000460378 PSMD5Q16401 504 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 MTSS1LQ765P7 747 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 PLVAPQ9BX97 442 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 NEMP1O14524 444 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 PABPC1LQ4VXU2 614 aaKnown RBP10.72□□□□□ -0.69
EPB41-208ENST00000460378 CCDC114Q96M63 670 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 ALS2CR12Q96Q35 445 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 SYNDIG1Q9H7V2 258 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 MYO9BQ13459 2157 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 SBF2Q86WG5 1849 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 SPTLC1O15269 473 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 CTAGE5O15320 804 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 LAMTOR4Q0VGL1 99 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 NECTIN1Q15223 517 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 CAVIN1Q6NZI2 390 aaKnown RBP10.71□□□□□ -0.69
EPB41-208ENST00000460378 SH2D3AQ9BRG2 576 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 NUP62CLQ9H1M0 184 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 ABI2Q9NYB9 513 aaPredicted RBP10.71□□□□□ -0.69
EPB41-208ENST00000460378 SEL1LQ9UBV2 794 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 ZNF263O14978 683 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 RNASEH1O60930 286 aaKnown RBP10.71□□□□□ -0.69
EPB41-208ENST00000460378 PAX3P23760 479 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 NPEPPSP55786 919 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 UBE3AQ05086 875 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 DMWDQ09019 674 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 TROAPQ12815 778 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 HSDL1Q3SXM5 330 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 POTEDQ86YR6 584 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 GDPD5Q8WTR4 605 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 GJA10Q969M2 543 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 TRIM62Q9BVG3 475 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 JAK2O60674 1132 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 EYA4O95677 639 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 CHGBP05060 677 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 COL6A1P12109 1028 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 KRT9P35527 623 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 BMPR1AP36894 532 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 YWHAHQ04917 246 aaPredicted RBP10.71□□□□□ -0.69
EPB41-208ENST00000460378 TDRD12Q587J7 1177 aaKnown RBP10.71□□□□□ -0.69
EPB41-208ENST00000460378 NAALADL2Q58DX5 795 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 CMTR2Q8IYT2 770 aaKnown RBP10.71□□□□□ -0.69
EPB41-208ENST00000460378 CDX2Q99626 313 aaPredicted RBP10.71□□□□□ -0.69
EPB41-208ENST00000460378 CORO1BQ9BR76 489 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 AGO2Q9UKV8 859 aaKnown RBP10.71□□□□□ -0.69
EPB41-208ENST00000460378 DOLKQ9UPQ8 538 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 GIT1Q9Y2X7 761 aa10.71□□□□□ -0.69
EPB41-208ENST00000460378 A8MXQ7 604 aa10.71□□□□□ -0.7
EPB41-208ENST00000460378 H3BQ06 376 aaPredicted RBP10.71□□□□□ -0.7
EPB41-208ENST00000460378 MSH4O15457 936 aa10.71□□□□□ -0.7
EPB41-208ENST00000460378 AP3M2P53677 418 aa10.71□□□□□ -0.7
EPB41-208ENST00000460378 RRP1BQ14684 758 aaKnown RBP10.71□□□□□ -0.7
EPB41-208ENST00000460378 C17orf75Q9HAS0 396 aa10.71□□□□□ -0.7
EPB41-208ENST00000460378 SCN7AQ01118 1682 aa10.71□□□□□ -0.7
EPB41-208ENST00000460378 POTEMA6NI47 508 aa10.71□□□□□ -0.7
EPB41-208ENST00000460378 ICAM3P32942 547 aa10.71□□□□□ -0.7
EPB41-208ENST00000460378 GUCY1A2P33402 732 aa10.71□□□□□ -0.7
EPB41-208ENST00000460378 SPECC1Q5M775 1068 aa10.71□□□□□ -0.7
EPB41-208ENST00000460378 KCTD17Q8N5Z5 321 aa10.71□□□□□ -0.7
EPB41-208ENST00000460378 FBXO18Q8NFZ0 1043 aa10.71□□□□□ -0.7
EPB41-208ENST00000460378 HASPINQ8TF76 798 aa10.71□□□□□ -0.7
EPB41-208ENST00000460378 GAD1Q99259 594 aa10.71□□□□□ -0.7
EPB41-208ENST00000460378 NAMPTP43490 491 aa10.7□□□□□ -0.7
EPB41-208ENST00000460378 SCRN1Q12765 414 aa10.7□□□□□ -0.7
EPB41-208ENST00000460378 NR5A1Q13285 461 aa10.7□□□□□ -0.7
EPB41-208ENST00000460378 PRIMPOLQ96LW4 560 aa10.7□□□□□ -0.7
EPB41-208ENST00000460378 PCIF1Q9H4Z3 704 aa10.7□□□□□ -0.7
EPB41-208ENST00000460378 CBFA2T2O43439 604 aa10.7□□□□□ -0.7
EPB41-208ENST00000460378 FGFR4P22455 802 aa10.7□□□□□ -0.7
EPB41-208ENST00000460378 HSD17B4P51659 736 aa10.7□□□□□ -0.7
EPB41-208ENST00000460378 ARL6IP4Q66PJ3 421 aaKnown RBP10.7□□□□□ -0.7
EPB41-208ENST00000460378 GJD3Q8N144 294 aa10.7□□□□□ -0.7
EPB41-208ENST00000460378 HEXIM2Q96MH2 286 aaKnown RBP10.7□□□□□ -0.7
EPB41-208ENST00000460378 INPP4AQ96PE3 977 aaPredicted RBP10.7□□□□□ -0.7
EPB41-208ENST00000460378 NDRG2Q9UN36 371 aaKnown RBP10.7□□□□□ -0.7
EPB41-208ENST00000460378 FNDC3AQ9Y2H6 1198 aaKnown RBP10.7□□□□□ -0.7
EPB41-208ENST00000460378 AFDNP55196 1824 aaKnown RBP10.7□□□□□ -0.7
EPB41-208ENST00000460378 BNIP3LO60238 219 aa10.7□□□□□ -0.7
EPB41-208ENST00000460378 ZSCAN22P10073 491 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms