RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 NLRP4Q96MN2 994 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 ANTXR1Q9H6X2 564 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 SAYSD1Q9NPB0 183 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 PKD2L2Q9NZM6 624 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 SLAIN2Q9P270 581 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 MORC2Q9Y6X9 1032 aaPredicted RBP9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 RNF103-CHMP3A0A140T963 221 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 RASA4BC9J798 803 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 ANGPT2O15123 496 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 RASA4O43374 803 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 FGAP02671 866 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 A1BGP04217 495 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 FDX1P10109 184 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 IFNAR1P17181 557 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 PRAMEP78395 509 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 TMEM259Q4ZIN3 620 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 THEMIS2Q5TEJ8 643 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 SCARA5Q6ZMJ2 495 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 USP28Q96RU2 1077 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 NRBP1Q9UHY1 535 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 TBC1D4O60343 1298 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 PMS2P54278 862 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 SLC35F6Q8N357 371 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 KRT35Q92764 455 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 YIPF3Q9GZM5 350 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 NFKBIL1Q9UBC1 381 aaPredicted RBP9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 A0A0G2JND7 137 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 FAM107AO95990 144 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 CCNE1P24864 410 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 MRPS15P82914 257 aaKnown RBP9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 FOXP4Q8IVH2 680 aaPredicted RBP9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 ATP11CQ8NB49 1132 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 UHMK1Q8TAS1 419 aaKnown RBP9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 GTF3C2Q8WUA4 911 aaPredicted RBP9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 SNF8Q96H20 258 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 KCNQ4P56696 695 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 NLRP11P59045 1033 aaKnown RBP9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 C2orf54Q08AI8 447 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 PTPROQ16827 1216 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 SPICE1Q8N0Z3 855 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 RUBCNLQ9H714 662 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 TJP2Q9UDY2 1190 aa9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 MAGED2Q9UNF1 606 aaPredicted RBP9.4□□□□□ -0.9
SHROOM4-203ENST00000460112 SNTNA6NMZ2 147 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 STXBP3O00186 592 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 EIF2S1P05198 315 aaKnown RBP9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 CRKLP46109 303 aaKnown RBP9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 TRPC1P48995 793 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 DOK7Q18PE1 504 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 DEPDC1Q5TB30 811 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 TAS2R42Q7RTR8 314 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 PRUNE1Q86TP1 453 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 MRPL48Q96GC5 212 aaKnown RBP9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 CNPY3Q9BT09 278 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 ADAM22Q9P0K1 906 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 URB1O60287 2271 aaKnown RBP9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 DAB1O75553 588 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 TOMM70O94826 608 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 FGGP02679 453 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 HSD17B4P51659 736 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 ST8SIA6P61647 398 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 CUL3Q13618 768 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 DMC1Q14565 340 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 ANO4Q32M45 955 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 P3H1Q32P28 736 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 PDCD6IPQ8WUM4 868 aaKnown RBP9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 MRPS26Q9BYN8 205 aaKnown RBP9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 LSG1Q9H089 658 aaKnown RBP9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 BFARQ9NZS9 450 aa9.4□□□□□ -0.91
SHROOM4-203ENST00000460112 ARHGEF40Q8TER5 1519 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 NDUFA10O95299 355 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 PRELPP51888 382 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 UGP2Q16851 508 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 CDO1Q16878 200 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 AASDHQ4L235 1098 aaPredicted RBP9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 ZMYM1Q5SVZ6 1142 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 G2E3Q7L622 706 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 PDLIM2Q96JY6 352 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 VPS9D1Q9Y2B5 631 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 ZHX2Q9Y6X8 837 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 CCDC88CQ9P219 2028 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 A0A0D9SFI3 127 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 PNMA6EA0A0J9YXQ4 647 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 A0A1W2PQC6 194 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 GUCA1CO95843 209 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 FBLN1P23142 703 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 EIF4A3P38919 411 aaKnown RBP9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 DEFA1P59665 94 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 DEFA3P59666 94 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 MTMR1Q13613 665 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 TERB1Q8NA31 727 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 PLEKHA8Q96JA3 519 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 OSBPL9Q96SU4 736 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 FRMD8Q9BZ67 464 aaPredicted RBP9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 CHD4Q14839 1912 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 BTBD18B2RXH4 712 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 ORC4O43929 436 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 NCALDP61601 193 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 CEP55Q53EZ4 464 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 MTHFD1LQ6UB35 978 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms