RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 POTEDQ86YR6 584 aa23.98■■□□□ 1.43
CPNE1-220ENST00000458038 TPH2Q8IWU9 490 aa23.98■■□□□ 1.43
CPNE1-220ENST00000458038 HACE1Q8IYU2 909 aa23.98■■□□□ 1.43
CPNE1-220ENST00000458038 ANKEF1Q9NU02 776 aa23.98■■□□□ 1.43
CPNE1-220ENST00000458038 TPCN1Q9ULQ1 816 aa23.98■■□□□ 1.43
CPNE1-220ENST00000458038 TDRD15B5MCY1 1934 aaKnown RBP23.97■■□□□ 1.43
CPNE1-220ENST00000458038 GALR2O43603 387 aaPredicted RBP23.97■■□□□ 1.43
CPNE1-220ENST00000458038 SLITRK3O94933 977 aa23.97■■□□□ 1.43
CPNE1-220ENST00000458038 C1RP00736 705 aa23.97■■□□□ 1.43
CPNE1-220ENST00000458038 POMCP01189 267 aa23.97■■□□□ 1.43
CPNE1-220ENST00000458038 URODP06132 367 aa23.97■■□□□ 1.43
CPNE1-220ENST00000458038 KRT2P35908 639 aa23.97■■□□□ 1.43
CPNE1-220ENST00000458038 CTTNQ14247 550 aaKnown RBP23.97■■□□□ 1.43
CPNE1-220ENST00000458038 SMG8Q8ND04 991 aaKnown RBP23.97■■□□□ 1.43
CPNE1-220ENST00000458038 CMASQ8NFW8 434 aaPredicted RBP23.97■■□□□ 1.43
CPNE1-220ENST00000458038 ATOH1Q92858 354 aaPredicted RBP23.97■■□□□ 1.43
CPNE1-220ENST00000458038 RHOBTB2Q9BYZ6 727 aa23.97■■□□□ 1.43
CPNE1-220ENST00000458038 CSRNP2Q9H175 543 aa23.97■■□□□ 1.43
CPNE1-220ENST00000458038 RIF1Q5UIP0 2472 aaKnown RBP23.96■■□□□ 1.43
CPNE1-220ENST00000458038 DGAT1O75907 488 aa23.96■■□□□ 1.43
CPNE1-220ENST00000458038 PDGFBP01127 241 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-220ENST00000458038 ADH1AP07327 375 aa23.96■■□□□ 1.43
CPNE1-220ENST00000458038 AFF1P51825 1210 aaKnown RBP23.96■■□□□ 1.43
CPNE1-220ENST00000458038 CYP4A11Q02928 519 aa23.96■■□□□ 1.43
CPNE1-220ENST00000458038 KANK3Q6NY19 840 aa23.96■■□□□ 1.43
CPNE1-220ENST00000458038 COLGALT2Q8IYK4 626 aa23.96■■□□□ 1.43
CPNE1-220ENST00000458038 RPS6KC1Q96S38 1066 aa23.96■■□□□ 1.43
CPNE1-220ENST00000458038 HSD17B14Q9BPX1 270 aa23.96■■□□□ 1.43
CPNE1-220ENST00000458038 NFKBIZQ9BYH8 718 aa23.96■■□□□ 1.43
CPNE1-220ENST00000458038 IPPQ9Y573 584 aa23.96■■□□□ 1.43
CPNE1-220ENST00000458038 CFAP54Q96N23 3096 aa23.96■■□□□ 1.43
CPNE1-220ENST00000458038 ARL5CA6NH57 179 aa23.95■■□□□ 1.42
CPNE1-220ENST00000458038 TSPAN1O60635 241 aa23.95■■□□□ 1.42
CPNE1-220ENST00000458038 SSBP05455 408 aaKnown RBP eCLIP23.95■■□□□ 1.42
CPNE1-220ENST00000458038 ASGR2P07307 311 aa23.95■■□□□ 1.42
CPNE1-220ENST00000458038 CLCN5P51795 746 aa23.95■■□□□ 1.42
CPNE1-220ENST00000458038 ASTLQ6HA08 431 aaPredicted RBP23.95■■□□□ 1.42
CPNE1-220ENST00000458038 GPR65Q8IYL9 337 aa23.95■■□□□ 1.42
CPNE1-220ENST00000458038 EIF2AK1Q9BQI3 630 aaKnown RBP23.95■■□□□ 1.42
CPNE1-220ENST00000458038 HERC2P3Q9BVR0 1158 aa23.95■■□□□ 1.42
CPNE1-220ENST00000458038 XPNPEP1Q9NQW7 623 aa23.95■■□□□ 1.42
CPNE1-220ENST00000458038 BMP2KQ9NSY1 1161 aaPredicted RBP23.95■■□□□ 1.42
CPNE1-220ENST00000458038 GJB4Q9NTQ9 266 aa23.95■■□□□ 1.42
CPNE1-220ENST00000458038 GIT1Q9Y2X7 761 aa23.95■■□□□ 1.42
CPNE1-220ENST00000458038 C2orf16Q68DN1 1984 aa23.94■■□□□ 1.42
CPNE1-220ENST00000458038 INO80B-WBP1J3KQ70 363 aa23.94■■□□□ 1.42
CPNE1-220ENST00000458038 ZBTB39O15060 712 aa23.94■■□□□ 1.42
CPNE1-220ENST00000458038 CTDNEP1O95476 244 aa23.94■■□□□ 1.42
CPNE1-220ENST00000458038 XRCC6P12956 609 aaKnown RBP eCLIP23.94■■□□□ 1.42
CPNE1-220ENST00000458038 OR1G1P47890 313 aa23.94■■□□□ 1.42
CPNE1-220ENST00000458038 AK2P54819 239 aa23.94■■□□□ 1.42
CPNE1-220ENST00000458038 DSC1Q08554 894 aa23.94■■□□□ 1.42
CPNE1-220ENST00000458038 EARS2Q5JPH6 523 aaKnown RBP23.94■■□□□ 1.42
CPNE1-220ENST00000458038 HDAC7Q8WUI4 952 aa23.94■■□□□ 1.42
CPNE1-220ENST00000458038 TNFRSF25Q93038 417 aa23.94■■□□□ 1.42
CPNE1-220ENST00000458038 CCDC43Q96MW1 224 aaKnown RBP23.94■■□□□ 1.42
CPNE1-220ENST00000458038 TRIM6Q9C030 488 aaPredicted RBP23.94■■□□□ 1.42
CPNE1-220ENST00000458038 MFSD1Q9H3U5 465 aa23.94■■□□□ 1.42
CPNE1-220ENST00000458038 ZMYM2Q9UBW7 1377 aa23.93■■□□□ 1.42
CPNE1-220ENST00000458038 MTCL1Q9Y4B5 1905 aaKnown RBP23.93■■□□□ 1.42
CPNE1-220ENST00000458038 TDGQ13569 410 aa23.93■■□□□ 1.42
CPNE1-220ENST00000458038 CALCRLQ16602 461 aa23.93■■□□□ 1.42
CPNE1-220ENST00000458038 GAD1Q99259 594 aa23.93■■□□□ 1.42
CPNE1-220ENST00000458038 COLEC11Q9BWP8 271 aa23.93■■□□□ 1.42
CPNE1-220ENST00000458038 RXFP1Q9HBX9 757 aa23.93■■□□□ 1.42
CPNE1-220ENST00000458038 IGSF9Q9P2J2 1179 aa23.93■■□□□ 1.42
CPNE1-220ENST00000458038 PROB1E7EW31 1015 aa23.92■■□□□ 1.42
CPNE1-220ENST00000458038 EFEMP2O95967 443 aa23.92■■□□□ 1.42
CPNE1-220ENST00000458038 ARL2P36404 184 aa23.92■■□□□ 1.42
CPNE1-220ENST00000458038 GLUD2P49448 558 aa23.92■■□□□ 1.42
CPNE1-220ENST00000458038 NR5A1Q13285 461 aa23.92■■□□□ 1.42
CPNE1-220ENST00000458038 KIAA0319Q5VV43 1072 aa23.92■■□□□ 1.42
CPNE1-220ENST00000458038 RNF168Q8IYW5 571 aaPredicted RBP23.92■■□□□ 1.42
CPNE1-220ENST00000458038 STAMQ92783 540 aa23.92■■□□□ 1.42
CPNE1-220ENST00000458038 EIF2AQ9BY44 585 aaKnown RBP23.92■■□□□ 1.42
CPNE1-220ENST00000458038 TTC12Q9H892 705 aaPredicted RBP23.92■■□□□ 1.42
CPNE1-220ENST00000458038 MARCH5Q9NX47 278 aa23.92■■□□□ 1.42
CPNE1-220ENST00000458038 DAXXQ9UER7 740 aaPredicted RBP23.92■■□□□ 1.42
CPNE1-220ENST00000458038 PRG3Q9Y2Y8 225 aaPredicted RBP23.92■■□□□ 1.42
CPNE1-220ENST00000458038 FAM186AA6NE01 2351 aa23.91■■□□□ 1.42
CPNE1-220ENST00000458038 H0Y858 1186 aa23.91■■□□□ 1.42
CPNE1-220ENST00000458038 C2CD2LO14523 706 aa23.91■■□□□ 1.42
CPNE1-220ENST00000458038 GFRA3O60609 400 aa23.91■■□□□ 1.42
CPNE1-220ENST00000458038 GLUD1P00367 558 aa23.91■■□□□ 1.42
CPNE1-220ENST00000458038 MLH1P40692 756 aa23.91■■□□□ 1.42
CPNE1-220ENST00000458038 DSG1Q02413 1049 aa23.91■■□□□ 1.42
CPNE1-220ENST00000458038 MBTD1Q05BQ5 628 aa23.91■■□□□ 1.42
CPNE1-220ENST00000458038 CAPSQ13938 189 aa23.91■■□□□ 1.42
CPNE1-220ENST00000458038 CPB2Q96IY4 423 aa23.91■■□□□ 1.42
CPNE1-220ENST00000458038 RNF39Q9H2S5 420 aa23.91■■□□□ 1.42
CPNE1-220ENST00000458038 PLEKHA4Q9H4M7 779 aa23.91■■□□□ 1.42
CPNE1-220ENST00000458038 MAN1C1Q9NR34 630 aa23.91■■□□□ 1.42
CPNE1-220ENST00000458038 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.91■■□□□ 1.42
CPNE1-220ENST00000458038 TEX28O15482 410 aa23.9■■□□□ 1.42
CPNE1-220ENST00000458038 NEMFO60524 1076 aa23.9■■□□□ 1.42
CPNE1-220ENST00000458038 FDPSP14324 419 aaKnown RBP23.9■■□□□ 1.42
CPNE1-220ENST00000458038 ARF4P18085 180 aaPredicted RBP23.9■■□□□ 1.42
CPNE1-220ENST00000458038 RARRES1P49788 294 aa23.9■■□□□ 1.42
CPNE1-220ENST00000458038 AMHR2Q16671 573 aa23.9■■□□□ 1.42
CPNE1-220ENST00000458038 SLC27A1Q6PCB7 646 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms