RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 N4BP3O15049 544 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 DGKIO75912 1065 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 EOMESO95936 686 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 STAG3L1P0CL83 205 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 SKIP12755 728 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 MYOGP15173 224 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 PROZP22891 400 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 CASP5P51878 434 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 DPYDQ12882 1025 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 ZC2HC1CQ53FD0 456 aaPredicted RBP15.53■□□□□ 0.08
SMPD4-215ENST00000457039 ATF7IP2Q5U623 682 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 EEF1DP3Q658K8 133 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 FAM117BQ6P1L5 589 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 MRPL10Q7Z7H8 261 aaKnown RBP15.53■□□□□ 0.08
SMPD4-215ENST00000457039 MAP4K3Q8IVH8 894 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 SMG8Q8ND04 991 aaKnown RBP15.53■□□□□ 0.08
SMPD4-215ENST00000457039 SP7Q8TDD2 431 aaPredicted RBP15.53■□□□□ 0.08
SMPD4-215ENST00000457039 HPS3Q969F9 1004 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 GBP4Q96PP9 640 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 TARS2Q9BW92 718 aaKnown RBP15.53■□□□□ 0.08
SMPD4-215ENST00000457039 MRPL44Q9H9J2 332 aaKnown RBP15.53■□□□□ 0.08
SMPD4-215ENST00000457039 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
SMPD4-215ENST00000457039 TBC1D7Q9P0N9 293 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 TNFSF13BQ9Y275 285 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 PCDHB7Q9Y5E2 793 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 PCDHB2Q9Y5E7 798 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 GBF1Q92538 1859 aa15.52■□□□□ 0.08
SMPD4-215ENST00000457039 TLL1O43897 1013 aa15.52■□□□□ 0.08
SMPD4-215ENST00000457039 PIGRP01833 764 aa15.52■□□□□ 0.08
SMPD4-215ENST00000457039 ABCD1P33897 745 aa15.52■□□□□ 0.08
SMPD4-215ENST00000457039 STRN3Q13033 797 aa15.52■□□□□ 0.08
SMPD4-215ENST00000457039 RAB30Q15771 203 aa15.52■□□□□ 0.08
SMPD4-215ENST00000457039 KANK3Q6NY19 840 aa15.52■□□□□ 0.08
SMPD4-215ENST00000457039 ZPBP2Q6X784 338 aa15.52■□□□□ 0.08
SMPD4-215ENST00000457039 ELOA2Q8IYF1 753 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-215ENST00000457039 HVCN1Q96D96 273 aa15.52■□□□□ 0.08
SMPD4-215ENST00000457039 LRCH3Q96II8 777 aa15.52■□□□□ 0.08
SMPD4-215ENST00000457039 LMBRD1Q9NUN5 540 aa15.52■□□□□ 0.08
SMPD4-215ENST00000457039 LRFN2Q9ULH4 789 aa15.52■□□□□ 0.08
SMPD4-215ENST00000457039 IPPQ9Y573 584 aa15.52■□□□□ 0.08
SMPD4-215ENST00000457039 INSL6Q9Y581 213 aa15.52■□□□□ 0.08
SMPD4-215ENST00000457039 LCHNA4D1U4 455 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 MEIS3P2A8K0S8 358 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 ARHGEF15O94989 841 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 NPTXRO95502 500 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 MYBP10242 640 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 DNAJB2P25686 324 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 GATMP50440 423 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 ALCAMQ13740 583 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 POSTNQ15063 836 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 KMT5BQ4FZB7 885 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 CLLU1OSQ5K130 101 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 FAM26FQ5R3K3 315 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 EPM2AIP1Q7L775 607 aaPredicted RBP15.51■□□□□ 0.07
SMPD4-215ENST00000457039 GLIS3Q8NEA6 775 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 ZBED2Q9BTP6 218 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 MSRAQ9UJ68 235 aa15.51■□□□□ 0.07
SMPD4-215ENST00000457039 HOXA2O43364 376 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 TOM1L1O75674 476 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 GCNT3O95395 438 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 RPN1P04843 607 aaKnown RBP15.5■□□□□ 0.07
SMPD4-215ENST00000457039 CA3P07451 260 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 LINC00271P0C7V0 271 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 FGFR1P11362 822 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 IBSPP21815 317 aaPredicted RBP15.5■□□□□ 0.07
SMPD4-215ENST00000457039 FXR1P51114 621 aaKnown RBP eCLIP15.5■□□□□ 0.07
SMPD4-215ENST00000457039 KCNA1Q09470 495 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 L1TD1Q5T7N2 865 aaKnown RBP15.5■□□□□ 0.07
SMPD4-215ENST00000457039 SLC39A4Q6P5W5 647 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 AGMOQ6ZNB7 445 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 LPPQ93052 612 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 TIFAQ96CG3 184 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 CCDC34Q96HJ3 373 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 ZBTB45Q96K62 511 aaPredicted RBP15.5■□□□□ 0.07
SMPD4-215ENST00000457039 CASD1Q96PB1 797 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 YME1L1Q96TA2 773 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 CDT1Q9H211 546 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 RNF39Q9H2S5 420 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 NKX2-4Q9H2Z4 354 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 NXF3Q9H4D5 531 aaKnown RBP15.5■□□□□ 0.07
SMPD4-215ENST00000457039 HES2Q9Y543 173 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 PCDHB13Q9Y5F0 798 aa15.5■□□□□ 0.07
SMPD4-215ENST00000457039 SZT2Q5T011 3432 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 CHD7Q9P2D1 2997 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 EIF3DO15371 548 aaKnown RBP eCLIP15.49■□□□□ 0.07
SMPD4-215ENST00000457039 HOXD13P35453 343 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 PNOCQ13519 176 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 KCNB1Q14721 858 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 TMEM132AQ24JP5 1023 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 DCAF4L1Q3SXM0 396 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 GPR153Q6NV75 609 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 MPZL3Q6UWV2 235 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 CMTR2Q8IYT2 770 aaKnown RBP15.49■□□□□ 0.07
SMPD4-215ENST00000457039 RNF169Q8NCN4 708 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 SPATA20Q8TB22 786 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 PGBD4Q96DM1 585 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 ADPGKQ9BRR6 497 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 TRIM6Q9C030 488 aaPredicted RBP15.49■□□□□ 0.07
SMPD4-215ENST00000457039 HAPLN2Q9GZV7 340 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 TMEM117Q9H0C3 514 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms