RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 MAFO75444 373 aaPredicted RBP11.09□□□□□ -0.63
CLCN4-204ENST00000454850 STBD1O95210 358 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 SRGAP2CP0DJJ0 459 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 ITGA4P13612 1032 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 SNW1Q13573 536 aaKnown RBP11.09□□□□□ -0.63
CLCN4-204ENST00000454850 UBXN2BQ14CS0 331 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 ADCK5Q3MIX3 580 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 UBXN11Q5T124 520 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 RNF20Q5VTR2 975 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 CYP26C1Q6V0L0 522 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 DHX32Q7L7V1 743 aaKnown RBP11.09□□□□□ -0.63
CLCN4-204ENST00000454850 MRPL10Q7Z7H8 261 aaKnown RBP11.09□□□□□ -0.63
CLCN4-204ENST00000454850 MAML2Q8IZL2 1156 aaPredicted RBP11.09□□□□□ -0.63
CLCN4-204ENST00000454850 BICD2Q8TD16 824 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 APOL6Q9BWW8 343 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 NT5C3AQ9H0P0 336 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 MINDY3Q9H8M7 445 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 IFT122Q9HBG6 1241 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 SLC2A4RGQ9NR83 387 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLCN4-204ENST00000454850 COL4A3BPQ9Y5P4 624 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 F5P12259 2224 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 ZFHX4Q86UP3 3567 aa11.08□□□□□ -0.63
CLCN4-204ENST00000454850 TRIP11Q15643 1979 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 ANHXE9PGG2 379 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 LAMTOR5O43504 91 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 TGM5O43548 720 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 EDIL3O43854 480 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 GAS2O43903 313 aaKnown RBP11.08□□□□□ -0.64
CLCN4-204ENST00000454850 PSMD10O75832 226 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 TDP2O95551 362 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 RPL17P18621 184 aaKnown RBP11.08□□□□□ -0.64
CLCN4-204ENST00000454850 MLH1P40692 756 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 SCNN1GP51170 649 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 GPC5P78333 572 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 AKAP17AQ02040 695 aaKnown RBP11.08□□□□□ -0.64
CLCN4-204ENST00000454850 DSG1Q02413 1049 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 CSTF1Q05048 431 aaKnown RBP11.08□□□□□ -0.64
CLCN4-204ENST00000454850 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
CLCN4-204ENST00000454850 KIAA0319Q5VV43 1072 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 PARM1Q6UWI2 310 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 ANO5Q75V66 913 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 COLGALT2Q8IYK4 626 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 CCDC148Q8NFR7 591 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 RDM1Q8NG50 284 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 FGF14Q92915 247 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 TMEM143Q96AN5 459 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 SHDQ96IW2 340 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 GAD1Q99259 594 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 JPH2Q9BR39 696 aaPredicted RBP11.08□□□□□ -0.64
CLCN4-204ENST00000454850 RPP25Q9BUL9 199 aaKnown RBP11.08□□□□□ -0.64
CLCN4-204ENST00000454850 BCO2Q9BYV7 579 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 PRKD2Q9BZL6 878 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 RXFP1Q9HBX9 757 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 VPS54Q9P1Q0 977 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 HES2Q9Y543 173 aa11.08□□□□□ -0.64
CLCN4-204ENST00000454850 CCDC196A0A1B0GTZ2 297 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 ARL5CA6NH57 179 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 CPA1P15085 419 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 NCLP19338 710 aaKnown RBP11.07□□□□□ -0.64
CLCN4-204ENST00000454850 CD72P21854 359 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 FSHRP23945 695 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 HOXA11P31270 313 aaPredicted RBP11.07□□□□□ -0.64
CLCN4-204ENST00000454850 NPEPPSP55786 919 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 STARD6P59095 220 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 NTHL1P78549 312 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 MLF2Q15773 248 aaPredicted RBP11.07□□□□□ -0.64
CLCN4-204ENST00000454850 RNF168Q8IYW5 571 aaPredicted RBP11.07□□□□□ -0.64
CLCN4-204ENST00000454850 RASEFQ8IZ41 740 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 ZNF579Q8NAF0 562 aaKnown RBP11.07□□□□□ -0.64
CLCN4-204ENST00000454850 SMG8Q8ND04 991 aaKnown RBP11.07□□□□□ -0.64
CLCN4-204ENST00000454850 TBCKQ8TEA7 893 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 PRPF31Q8WWY3 499 aaKnown RBP11.07□□□□□ -0.64
CLCN4-204ENST00000454850 ATRIPQ8WXE1 791 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 SLC7A3Q8WY07 619 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 RABGGTAQ92696 567 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 ZFP42Q96MM3 310 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 SLC26A6Q9BXS9 759 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 EIF2AQ9BY44 585 aaKnown RBP11.07□□□□□ -0.64
CLCN4-204ENST00000454850 RHOBTB2Q9BYZ6 727 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 PLEKHA4Q9H4M7 779 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 ZDHHC7Q9NXF8 308 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 CDV3Q9UKY7 258 aaKnown RBP11.07□□□□□ -0.64
CLCN4-204ENST00000454850 MTF2Q9Y483 593 aaPredicted RBP11.07□□□□□ -0.64
CLCN4-204ENST00000454850 IPPQ9Y573 584 aa11.07□□□□□ -0.64
CLCN4-204ENST00000454850 KANSL1LA0AUZ9 987 aa11.06□□□□□ -0.64
CLCN4-204ENST00000454850 DCDC2BA2VCK2 349 aa11.06□□□□□ -0.64
CLCN4-204ENST00000454850 FAM170BA6NMN3 283 aa11.06□□□□□ -0.64
CLCN4-204ENST00000454850 SPTLC1O15269 473 aa11.06□□□□□ -0.64
CLCN4-204ENST00000454850 PRPF3O43395 683 aaKnown RBP11.06□□□□□ -0.64
CLCN4-204ENST00000454850 NR1I2O75469 434 aa11.06□□□□□ -0.64
CLCN4-204ENST00000454850 ERLIN2O94905 339 aa11.06□□□□□ -0.64
CLCN4-204ENST00000454850 USP11P51784 963 aa11.06□□□□□ -0.64
CLCN4-204ENST00000454850 RCAN1P53805 252 aa11.06□□□□□ -0.64
CLCN4-204ENST00000454850 ATXN1P54253 815 aaKnown RBP11.06□□□□□ -0.64
CLCN4-204ENST00000454850 NLRP5P59047 1200 aa11.06□□□□□ -0.64
CLCN4-204ENST00000454850 PSMC5P62195 406 aa11.06□□□□□ -0.64
CLCN4-204ENST00000454850 DSC1Q08554 894 aa11.06□□□□□ -0.64
CLCN4-204ENST00000454850 LAMTOR4Q0VGL1 99 aa11.06□□□□□ -0.64
CLCN4-204ENST00000454850 USP41Q3LFD5 358 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms