RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 INTUQ9ULD6 942 aa20.57■□□□□ 0.88
HMGA1-205ENST00000447654 PAIP2BQ9ULR5 123 aaKnown RBP20.57■□□□□ 0.88
HMGA1-205ENST00000447654 CNTNAP5Q8WYK1 1306 aa20.57■□□□□ 0.88
HMGA1-205ENST00000447654 PASKQ96RG2 1323 aa20.57■□□□□ 0.88
HMGA1-205ENST00000447654 A0A087X0T9 212 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 FAM228BP0C875 321 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 RARGP13631 454 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 CDK7P50613 346 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 MPP3Q13368 585 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 USH1GQ495M9 461 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 TMEM259Q4ZIN3 620 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 LRRC74BQ6ZQY2 392 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 C4orf50Q6ZRC1 276 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 PEX26Q7Z412 305 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 ZNF804AQ7Z570 1209 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 TGFBRAP1Q8WUH2 860 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 DDX27Q96GQ7 796 aaKnown RBP20.56■□□□□ 0.88
HMGA1-205ENST00000447654 TRIM9Q9C026 710 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 SAR1AQ9NR31 198 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 MAP3K7O43318 606 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 LYNP07948 512 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 PABPC4LP0CB38 370 aaKnown RBP20.56■□□□□ 0.88
HMGA1-205ENST00000447654 MCM7P33993 719 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 UBA7P41226 1012 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 PHEXP78562 749 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 KCNMA1Q12791 1236 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 KIAA1755Q5JYT7 1200 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 CGB2Q6NT52 195 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 ZDHHC24Q6UX98 284 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 DTHD1Q6ZMT9 781 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 ARHGEF18Q6ZSZ5 1173 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 C15orf52Q6ZUT6 534 aaKnown RBP20.56■□□□□ 0.88
HMGA1-205ENST00000447654 DAAM2Q86T65 1068 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 TPCN2Q8NHX9 752 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 CATSPER2Q96P56 530 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 ZNF184Q99676 751 aaPredicted RBP20.56■□□□□ 0.88
HMGA1-205ENST00000447654 RTFDC1Q9BY42 306 aaPredicted RBP20.56■□□□□ 0.88
HMGA1-205ENST00000447654 CELF4Q9BZC1 486 aaKnown RBP20.56■□□□□ 0.88
HMGA1-205ENST00000447654 DHX36Q9H2U1 1008 aaKnown RBP20.56■□□□□ 0.88
HMGA1-205ENST00000447654 SEMA6BQ9H3T3 888 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 EPB41L1Q9H4G0 881 aa20.56■□□□□ 0.88
HMGA1-205ENST00000447654 TSPY2A6NKD2 308 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 LAD1O00515 517 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 RIPK2O43353 540 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 DDAH1O94760 285 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 ZFXP17010 805 aaPredicted RBP20.55■□□□□ 0.88
HMGA1-205ENST00000447654 STK4Q13043 487 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 PPP1R21Q6ZMI0 780 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 KRT27Q7Z3Y8 459 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 TTC8Q8TAM2 541 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 HES6Q96HZ4 224 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 PHACTR1Q9C0D0 580 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 STX18Q9P2W9 335 aaKnown RBP20.55■□□□□ 0.88
HMGA1-205ENST00000447654 ATAD5Q96QE3 1844 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 USP17L3A6NCW0 530 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 USP17L4A6NCW7 530 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 H0Y3Z8 333 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 TFAP4Q01664 338 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 KLHL30Q0D2K2 578 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 STRN3Q13033 797 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 SLC27A3Q5K4L6 730 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 VSTM1Q6UX27 236 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 TRMT10CQ7L0Y3 403 aaKnown RBP20.55■□□□□ 0.88
HMGA1-205ENST00000447654 USP17L1Q7RTZ2 530 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 MAPKAPK5Q8IW41 473 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 EPS8L3Q8TE67 593 aaKnown RBP20.55■□□□□ 0.88
HMGA1-205ENST00000447654 RSPH1Q8WYR4 309 aa20.55■□□□□ 0.88
HMGA1-205ENST00000447654 ASCC2Q9H1I8 757 aaPredicted RBP20.55■□□□□ 0.88
HMGA1-205ENST00000447654 SAP30BPQ9UHR5 308 aaKnown RBP20.55■□□□□ 0.88
HMGA1-205ENST00000447654 SMIM31A0A1B0GVY4 71 aa20.54■□□□□ 0.88
HMGA1-205ENST00000447654 PODXLO00592 558 aa20.54■□□□□ 0.88
HMGA1-205ENST00000447654 KIAA0391O15091 583 aaKnown RBP20.54■□□□□ 0.88
HMGA1-205ENST00000447654 MAGEB2O15479 319 aa20.54■□□□□ 0.88
HMGA1-205ENST00000447654 GNA14O95837 355 aa20.54■□□□□ 0.88
HMGA1-205ENST00000447654 ITGA2BP08514 1039 aa20.54■□□□□ 0.88
HMGA1-205ENST00000447654 CALM1P0DP23 149 aa20.54■□□□□ 0.88
HMGA1-205ENST00000447654 CALM2P0DP24 149 aa20.54■□□□□ 0.88
HMGA1-205ENST00000447654 CALM3P0DP25 149 aa20.54■□□□□ 0.88
HMGA1-205ENST00000447654 EIF4BP23588 611 aaKnown RBP20.54■□□□□ 0.88
HMGA1-205ENST00000447654 ITGA9Q13797 1035 aa20.54■□□□□ 0.88
HMGA1-205ENST00000447654 ARHGEF2Q92974 986 aaKnown RBP20.54■□□□□ 0.88
HMGA1-205ENST00000447654 ERP27Q96DN0 273 aa20.54■□□□□ 0.88
HMGA1-205ENST00000447654 TRIM51Q9BSJ1 452 aa20.54■□□□□ 0.88
HMGA1-205ENST00000447654 TUBB6Q9BUF5 446 aa20.54■□□□□ 0.88
HMGA1-205ENST00000447654 CCDC113Q9H0I3 377 aa20.54■□□□□ 0.88
HMGA1-205ENST00000447654 ENTPD5O75356 428 aa20.53■□□□□ 0.88
HMGA1-205ENST00000447654 NOL4O94818 638 aa20.53■□□□□ 0.88
HMGA1-205ENST00000447654 ASIC2Q16515 512 aa20.53■□□□□ 0.88
HMGA1-205ENST00000447654 MARK2Q7KZI7 788 aaKnown RBP20.53■□□□□ 0.88
HMGA1-205ENST00000447654 AK8Q96MA6 479 aa20.53■□□□□ 0.88
HMGA1-205ENST00000447654 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.53■□□□□ 0.88
HMGA1-205ENST00000447654 YIPF2Q9BWQ6 316 aa20.53■□□□□ 0.88
HMGA1-205ENST00000447654 GGA1Q9UJY5 639 aa20.53■□□□□ 0.88
HMGA1-205ENST00000447654 IL1R1P14778 569 aa20.53■□□□□ 0.88
HMGA1-205ENST00000447654 HSPA6P17066 643 aa20.53■□□□□ 0.88
HMGA1-205ENST00000447654 STX2P32856 288 aa20.53■□□□□ 0.88
HMGA1-205ENST00000447654 PSMD7P51665 324 aa20.53■□□□□ 0.88
HMGA1-205ENST00000447654 PLTPP55058 493 aa20.53■□□□□ 0.88
HMGA1-205ENST00000447654 PPP4CP60510 307 aa20.53■□□□□ 0.88
HMGA1-205ENST00000447654 TXNRD1Q16881 649 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms