RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TFRCP02786 760 aaKnown RBP9.09□□□□□ -0.95
PTPN3-204ENST00000446349 GARTP22102 1010 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 CCT5P48643 541 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 KCNQ4P56696 695 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 PPP4CP60510 307 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 GUCY2DQ02846 1103 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 TMEM132DQ14C87 1099 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 ZNF484Q5JVG2 852 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 SCARA5Q6ZMJ2 495 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 MYLK4Q86YV6 388 aaPredicted RBP9.09□□□□□ -0.95
PTPN3-204ENST00000446349 SNX19Q92543 992 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 DNAJC12Q9UKB3 198 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 A0A0G2JLW4 131 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 POTEB3A0JP26 581 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 POC1B-GALNT4F8VUJ3 575 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 GOLGA8TH3BQL2 631 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 P4HA2O15460 535 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 PRKCQQ04759 706 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 COASYQ13057 564 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 POTEBQ6S5H4 581 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 GBP7Q8N8V2 638 aaPredicted RBP9.09□□□□□ -0.95
PTPN3-204ENST00000446349 NSMCE4AQ9NXX6 385 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 CNOT8Q9UFF9 292 aaKnown RBP9.09□□□□□ -0.95
PTPN3-204ENST00000446349 ANAPC7Q9UJX3 599 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 LGALS16A8MUM7 142 aa9.09□□□□□ -0.96
PTPN3-204ENST00000446349 SLC8A1P32418 973 aa9.09□□□□□ -0.96
PTPN3-204ENST00000446349 PLD1Q13393 1074 aa9.09□□□□□ -0.96
PTPN3-204ENST00000446349 FAM83AQ86UY5 434 aa9.09□□□□□ -0.96
PTPN3-204ENST00000446349 SOCS4Q8WXH5 440 aa9.09□□□□□ -0.96
PTPN3-204ENST00000446349 NRBF2Q96F24 287 aa9.09□□□□□ -0.96
PTPN3-204ENST00000446349 ZFP91Q96JP5 570 aaPredicted RBP9.09□□□□□ -0.96
PTPN3-204ENST00000446349 AXIN2Q9Y2T1 843 aa9.09□□□□□ -0.96
PTPN3-204ENST00000446349 NWD1Q149M9 1564 aa9.09□□□□□ -0.96
PTPN3-204ENST00000446349 IGSF9BQ9UPX0 1349 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 GNGT2O14610 69 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 NDUFA10O95299 355 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 CELF2O95319 508 aaKnown RBP9.08□□□□□ -0.96
PTPN3-204ENST00000446349 PYGBP11216 843 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 GUCY2FP51841 1108 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 SLITRK1Q96PX8 696 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 VPS9D1Q9Y2B5 631 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 PCDHB6Q9Y5E3 794 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 EXOC1LA0A1B0GW35 172 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 GSG1L2A8MUP6 293 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 LUC7L3O95232 432 aaKnown RBP9.08□□□□□ -0.96
PTPN3-204ENST00000446349 DR1Q01658 176 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 ZNF677Q86XU0 584 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 RHOT1Q8IXI2 618 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 PIGOQ8TEQ8 1089 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 DPH5Q9H2P9 285 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.08□□□□□ -0.96
PTPN3-204ENST00000446349 BFARQ9NZS9 450 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 PTPN22Q9Y2R2 807 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 DAGLAQ9Y4D2 1042 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 IPPQ9Y573 584 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 SLC4A7Q9Y6M7 1214 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 ZC3H4Q9UPT8 1303 aaKnown RBP9.08□□□□□ -0.96
PTPN3-204ENST00000446349 GRID2IPA4D2P6 1211 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 PRRG1O14668 218 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 ATP2C1P98194 919 aaPredicted RBP9.08□□□□□ -0.96
PTPN3-204ENST00000446349 KCNH2Q12809 1159 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 LRRC41Q15345 812 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 TEDDM1Q5T9Z0 273 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 TRIM67Q6ZTA4 783 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 SCYL3Q8IZE3 742 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 SCFD1Q8WVM8 642 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 STN1Q9H668 368 aaKnown RBP9.08□□□□□ -0.96
PTPN3-204ENST00000446349 CATSPERBQ9H7T0 1116 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 OLA1Q9NTK5 396 aaKnown RBP9.08□□□□□ -0.96
PTPN3-204ENST00000446349 EFCAB14O75071 495 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 APOA4P06727 396 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 FKBP1AP62942 108 aaKnown RBP9.08□□□□□ -0.96
PTPN3-204ENST00000446349 TMEM270Q6UE05 265 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 NOP9Q86U38 636 aaKnown RBP9.08□□□□□ -0.96
PTPN3-204ENST00000446349 TMEM63CQ9P1W3 806 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 SH3BP1Q9Y3L3 701 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 TECPR2O15040 1411 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 KRT16P08779 473 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 GRIK1P39086 918 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 GMPSP49915 693 aaPredicted RBP9.08□□□□□ -0.96
PTPN3-204ENST00000446349 ELAVL2Q12926 359 aaKnown RBP9.08□□□□□ -0.96
PTPN3-204ENST00000446349 TMED2Q15363 201 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 PDCD2Q16342 344 aaPredicted RBP9.08□□□□□ -0.96
PTPN3-204ENST00000446349 CRLF3Q8IUI8 442 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 HSPH1Q92598 858 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 KIFC3Q9BVG8 833 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 TXLNGQ9NUQ3 528 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 PPLO60437 1756 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 PSMC1P62191 440 aaKnown RBP9.08□□□□□ -0.96
PTPN3-204ENST00000446349 CYP27A1Q02318 531 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 VSTM4Q8IW00 320 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 LZICQ8WZA0 190 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 ULK4Q96C45 1275 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 CYP2D7A0A087X1C5 515 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 CYP2C8P10632 490 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 ART3Q13508 389 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 P3H1Q32P28 736 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 SFR1Q86XK3 245 aa9.08□□□□□ -0.96
PTPN3-204ENST00000446349 MB21D2Q8IYB1 491 aaPredicted RBP9.08□□□□□ -0.96
PTPN3-204ENST00000446349 EIF2AQ9BY44 585 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms