RNA–Protein interactions for RNA: ENST00000444179.5

SHC1-208, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-208ENST00000444179 C8orf76Q96K31 380 aa12.11□□□□□ -0.47
SHC1-208ENST00000444179 POLR3CQ9BUI4 534 aaPredicted RBP12.11□□□□□ -0.47
SHC1-208ENST00000444179 NFKBIZQ9BYH8 718 aa12.11□□□□□ -0.47
SHC1-208ENST00000444179 CSRNP2Q9H175 543 aa12.11□□□□□ -0.47
SHC1-208ENST00000444179 CXCL16Q9H2A7 254 aa12.11□□□□□ -0.47
SHC1-208ENST00000444179 FOXP1Q9H334 677 aaPredicted RBP12.11□□□□□ -0.47
SHC1-208ENST00000444179 NXF3Q9H4D5 531 aaKnown RBP12.11□□□□□ -0.47
SHC1-208ENST00000444179 POMKQ9H5K3 350 aa12.11□□□□□ -0.47
SHC1-208ENST00000444179 POLD4Q9HCU8 107 aa12.11□□□□□ -0.47
SHC1-208ENST00000444179 USP20Q9Y2K6 914 aa12.11□□□□□ -0.47
SHC1-208ENST00000444179 A0A1B0GUA9 196 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 TMEM221A6NGB7 291 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 M0R296 226 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 ERLIN2O94905 339 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 ALDH2P05091 517 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 EDN1P05305 212 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 SSBP05455 408 aaKnown RBP eCLIP12.1□□□□□ -0.47
SHC1-208ENST00000444179 CNPP09543 421 aaKnown RBP12.1□□□□□ -0.47
SHC1-208ENST00000444179 SRGAP2BP0DMP2 458 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 AKAP5P24588 427 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 AXLP30530 894 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
SHC1-208ENST00000444179 TOB1P50616 345 aaPredicted RBP12.1□□□□□ -0.47
SHC1-208ENST00000444179 SCNN1GP51170 649 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 DSC1Q08554 894 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 TFDP1Q14186 410 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 RARS2Q5T160 578 aaKnown RBP12.1□□□□□ -0.47
SHC1-208ENST00000444179 NOTUMQ6P988 496 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 CCDC51Q96ER9 411 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 KLHL5Q96PQ7 755 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 TMEM175Q9BSA9 504 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 APOL6Q9BWW8 343 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 TUFT1Q9NNX1 390 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 KANSL3Q9P2N6 904 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 DBR1Q9UK59 544 aaKnown RBP12.1□□□□□ -0.47
SHC1-208ENST00000444179 FAN1Q9Y2M0 1017 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 PRG3Q9Y2Y8 225 aaPredicted RBP12.1□□□□□ -0.47
SHC1-208ENST00000444179 DMDP11532 3685 aa12.1□□□□□ -0.47
SHC1-208ENST00000444179 ARID2Q68CP9 1835 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 C2CD4DB7Z1M9 353 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 OR52Z1P0C646 297 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 RPA1P27694 616 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 CLCN4P51793 760 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 PCBP1Q15365 356 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHC1-208ENST00000444179 SAFBQ15424 915 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHC1-208ENST00000444179 IL17AQ16552 155 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 PTPN21Q16825 1174 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 TPRNQ4KMQ1 711 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 TTC38Q5R3I4 469 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 CDCA2Q69YH5 1023 aaPredicted RBP12.09□□□□□ -0.47
SHC1-208ENST00000444179 BMP8AQ7Z5Y6 402 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 NOSTRINQ8IVI9 506 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 RNF168Q8IYW5 571 aaPredicted RBP12.09□□□□□ -0.47
SHC1-208ENST00000444179 CNNM3Q8NE01 707 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 RABGGTAQ92696 567 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 ASIC4Q96FT7 647 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 NACC1Q96RE7 527 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 SMOC2Q9H3U7 446 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 FZD8Q9H461 694 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 UBN1Q9NPG3 1134 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 KLK14Q9P0G3 267 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 PIEZO1Q92508 2521 aa12.09□□□□□ -0.47
SHC1-208ENST00000444179 LRRIQ4A6NIV6 560 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 EIF5BO60841 1220 aaKnown RBP12.08□□□□□ -0.48
SHC1-208ENST00000444179 NPTXRO95502 500 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 CYP11B2P19099 503 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 U2AF2P26368 475 aaKnown RBP eCLIP12.08□□□□□ -0.48
SHC1-208ENST00000444179 OR1G1P47890 313 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 RBM25P49756 843 aaKnown RBP12.08□□□□□ -0.48
SHC1-208ENST00000444179 ITIH3Q06033 890 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 IER5LQ5T953 404 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 KIAA0319Q5VV43 1072 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 SLC27A1Q6PCB7 646 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 PADI6Q6TGC4 694 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 TMC5Q6UXY8 1006 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 B3GALT6Q96L58 329 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 ZSCAN31Q96LW9 406 aaPredicted RBP12.08□□□□□ -0.48
SHC1-208ENST00000444179 FBXL18Q96ME1 805 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 CCDC113Q9H0I3 377 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 TSHZ2Q9NRE2 1034 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 CACNG4Q9UBN1 327 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 USP34Q70CQ2 3546 aa12.08□□□□□ -0.48
SHC1-208ENST00000444179 MYO15AQ9UKN7 3530 aa12.07□□□□□ -0.48
SHC1-208ENST00000444179 CARNS1A5YM72 827 aa12.07□□□□□ -0.48
SHC1-208ENST00000444179 C2CD2LO14523 706 aa12.07□□□□□ -0.48
SHC1-208ENST00000444179 PDGFBP01127 241 aaPredicted RBP12.07□□□□□ -0.48
SHC1-208ENST00000444179 SOD2P04179 222 aa12.07□□□□□ -0.48
SHC1-208ENST00000444179 IGFBP6P24592 240 aaPredicted RBP12.07□□□□□ -0.48
SHC1-208ENST00000444179 FXR2P51116 673 aaKnown RBP eCLIP12.07□□□□□ -0.48
SHC1-208ENST00000444179 NCBP1Q09161 790 aaKnown RBP12.07□□□□□ -0.48
SHC1-208ENST00000444179 ORC2Q13416 577 aaPredicted RBP12.07□□□□□ -0.48
SHC1-208ENST00000444179 GIT2Q14161 759 aa12.07□□□□□ -0.48
SHC1-208ENST00000444179 KIAA1841Q6NSI8 718 aa12.07□□□□□ -0.48
SHC1-208ENST00000444179 CES5AQ6NT32 575 aa12.07□□□□□ -0.48
SHC1-208ENST00000444179 MCPH1Q8NEM0 835 aa12.07□□□□□ -0.48
SHC1-208ENST00000444179 PBXIP1Q96AQ6 731 aa12.07□□□□□ -0.48
SHC1-208ENST00000444179 MFSD14AQ96MC6 490 aa12.07□□□□□ -0.48
SHC1-208ENST00000444179 CCDC43Q96MW1 224 aaKnown RBP12.07□□□□□ -0.48
SHC1-208ENST00000444179 FAM193BQ96PV7 902 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms