RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 MBLAC1A4D2B0 266 aaPredicted RBP8.41□□□□□ -1.06
SSXP3-201ENST00000442971 TEX28O15482 410 aa8.41□□□□□ -1.06
SSXP3-201ENST00000442971 SUV39H1O43463 412 aa8.41□□□□□ -1.06
SSXP3-201ENST00000442971 ZC3H11AO75152 810 aaKnown RBP eCLIP8.41□□□□□ -1.06
SSXP3-201ENST00000442971 RPL17P18621 184 aaKnown RBP8.41□□□□□ -1.06
SSXP3-201ENST00000442971 RASA1P20936 1047 aa8.41□□□□□ -1.06
SSXP3-201ENST00000442971 MCCP23508 829 aa8.41□□□□□ -1.06
SSXP3-201ENST00000442971 NFKB2Q00653 900 aa8.41□□□□□ -1.06
SSXP3-201ENST00000442971 RNASELQ05823 741 aaKnown RBP8.41□□□□□ -1.06
SSXP3-201ENST00000442971 GRM2Q14416 872 aa8.41□□□□□ -1.06
SSXP3-201ENST00000442971 TANGO2Q6ICL3 276 aa8.41□□□□□ -1.06
SSXP3-201ENST00000442971 GLRX5Q86SX6 157 aa8.41□□□□□ -1.06
SSXP3-201ENST00000442971 SPACA3Q8IXA5 215 aa8.41□□□□□ -1.06
SSXP3-201ENST00000442971 NPAS3Q8IXF0 933 aa8.41□□□□□ -1.06
SSXP3-201ENST00000442971 SRRM1Q8IYB3 904 aaKnown RBP8.41□□□□□ -1.06
SSXP3-201ENST00000442971 CAMKK1Q8N5S9 505 aa8.41□□□□□ -1.06
SSXP3-201ENST00000442971 SNIP1Q8TAD8 396 aaKnown RBP8.41□□□□□ -1.06
SSXP3-201ENST00000442971 NXPE2Q96DL1 559 aa8.41□□□□□ -1.06
SSXP3-201ENST00000442971 TAAR1Q96RJ0 339 aa8.41□□□□□ -1.06
SSXP3-201ENST00000442971 TRMT61BQ9BVS5 477 aaKnown RBP8.41□□□□□ -1.06
SSXP3-201ENST00000442971 PDCD11Q14690 1871 aaKnown RBP8.41□□□□□ -1.06
SSXP3-201ENST00000442971 GON4LQ3T8J9 2241 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 CARNS1A5YM72 827 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 ZNF316A6NFI3 1004 aaPredicted RBP8.4□□□□□ -1.06
SSXP3-201ENST00000442971 PLK4O00444 970 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 NOP56O00567 594 aaKnown RBP8.4□□□□□ -1.06
SSXP3-201ENST00000442971 APAF1O14727 1248 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 TTLL1O95922 423 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 DHPSP49366 369 aaPredicted RBP8.4□□□□□ -1.06
SSXP3-201ENST00000442971 AK2P54819 239 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 SP2Q02086 613 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 CCDC173Q0VFZ6 552 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 PPFIA1Q13136 1202 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 G3BP1Q13283 466 aaKnown RBP eCLIP8.4□□□□□ -1.06
SSXP3-201ENST00000442971 CLLU1OSQ5K130 101 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 MARCH8Q5T0T0 291 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 SLC23A3Q6PIS1 610 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 KCNV1Q6PIU1 500 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 C1orf228Q6PIY5 440 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 MAP4K3Q8IVH8 894 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 SYNPOQ8N3V7 929 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 ELSPBP1Q96BH3 223 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 CEP95Q96GE4 821 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 MTMR4Q9NYA4 1195 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 STK39Q9UEW8 545 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 PCDHB15Q9Y5E8 787 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 PCDHGA4Q9Y5G9 962 aa8.4□□□□□ -1.06
SSXP3-201ENST00000442971 NBASA2RRP1 2371 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 MED13LQ71F56 2210 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 GAS2O43903 313 aaKnown RBP8.39□□□□□ -1.07
SSXP3-201ENST00000442971 RPS6KA5O75582 802 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 UBA1P22314 1058 aaKnown RBP8.39□□□□□ -1.07
SSXP3-201ENST00000442971 MLLT6P55198 1093 aaPredicted RBP8.39□□□□□ -1.07
SSXP3-201ENST00000442971 TMPRSS3P57727 454 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 SLC14A1Q13336 389 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 GRIK4Q16099 956 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 C2orf27AQ580R0 203 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 RCSD1Q6JBY9 416 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 PKN3Q6P5Z2 889 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 C11orf74Q86VG3 221 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 VSIG10LQ86VR7 867 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 SPNS2Q8IVW8 549 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 NAXDQ8IW45 347 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 LCORLQ8N3X6 602 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 MINDY1Q8N5J2 469 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 PTCD2Q8WV60 388 aaKnown RBP8.39□□□□□ -1.07
SSXP3-201ENST00000442971 MSANTD3Q96H12 275 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 ZNF512BQ96KM6 892 aaPredicted RBP8.39□□□□□ -1.07
SSXP3-201ENST00000442971 RPS6KC1Q96S38 1066 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 RMDN3Q96TC7 470 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 REPIN1Q9BWE0 567 aaKnown RBP8.39□□□□□ -1.07
SSXP3-201ENST00000442971 MRPL9Q9BYD2 267 aaKnown RBP8.39□□□□□ -1.07
SSXP3-201ENST00000442971 CSRNP2Q9H175 543 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 CPNE5Q9HCH3 593 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 FSCN3Q9NQT6 498 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 ATP8A2Q9NTI2 1148 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 ST3GAL5Q9UNP4 418 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 INVSQ9Y283 1065 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 NOC2LQ9Y3T9 749 aaKnown RBP8.39□□□□□ -1.07
SSXP3-201ENST00000442971 ZMYM6O95789 1325 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 KDM3AQ9Y4C1 1321 aa8.39□□□□□ -1.07
SSXP3-201ENST00000442971 NIPBLQ6KC79 2804 aaeCLIP8.39□□□□□ -1.07
SSXP3-201ENST00000442971 NBEAL1Q6ZS30 2694 aa8.38□□□□□ -1.07
SSXP3-201ENST00000442971 PRKAB2O43741 272 aa8.38□□□□□ -1.07
SSXP3-201ENST00000442971 GALTP07902 379 aa8.38□□□□□ -1.07
SSXP3-201ENST00000442971 GDI1P31150 447 aa8.38□□□□□ -1.07
SSXP3-201ENST00000442971 KRT76Q01546 638 aa8.38□□□□□ -1.07
SSXP3-201ENST00000442971 TLE1Q04724 770 aa8.38□□□□□ -1.07
SSXP3-201ENST00000442971 CCINQ13939 588 aa8.38□□□□□ -1.07
SSXP3-201ENST00000442971 WDR43Q15061 677 aaKnown RBP eCLIP8.38□□□□□ -1.07
SSXP3-201ENST00000442971 ODR4Q5SWX8 454 aa8.38□□□□□ -1.07
SSXP3-201ENST00000442971 UTP14CQ5TAP6 766 aaKnown RBP8.38□□□□□ -1.07
SSXP3-201ENST00000442971 PALB2Q86YC2 1186 aa8.38□□□□□ -1.07
SSXP3-201ENST00000442971 OR2I1PQ8NGU4 316 aa8.38□□□□□ -1.07
SSXP3-201ENST00000442971 HELQQ8TDG4 1101 aa8.38□□□□□ -1.07
SSXP3-201ENST00000442971 ING5Q8WYH8 240 aa8.38□□□□□ -1.07
SSXP3-201ENST00000442971 CLUAP1Q96AJ1 413 aa8.38□□□□□ -1.07
SSXP3-201ENST00000442971 ZBTB10Q96DT7 871 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms