RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 HHIPL1Q96JK4 782 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 FAM167AQ96KS9 214 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 SUSD3Q96L08 255 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 CEP63Q96MT8 703 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 MED15Q96RN5 788 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 DUSP9Q99956 384 aaKnown RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 RUSC1Q9BVN2 902 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 SRRTQ9BXP5 876 aaKnown RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZHX3Q9H4I2 956 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 MRPL44Q9H9J2 332 aaKnown RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 MLXIPQ9HAP2 919 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 C17orf75Q9HAS0 396 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 VTA1Q9NP79 307 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 NRBP2Q9NSY0 501 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 LARSQ9P2J5 1176 aaKnown RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 CGNQ9P2M7 1197 aaKnown RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 MAPK8IP1Q9UQF2 711 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZKSCAN5Q9Y2L8 839 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 PCDHA2Q9Y5H9 948 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 PASKQ96RG2 1323 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 ARID2Q68CP9 1835 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 KAT6AQ92794 2004 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 LRRC37A2A6NM11 1700 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 IGKV6D-21A0A0A0MT36 114 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 NPHP3-ACAD11A0A0J9YXS1 232 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 A0A1W2PQC6 194 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 RBM47A0AV96 593 aaKnown RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 DCDC2BA2VCK2 349 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 LGALS16A8MUM7 142 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 NOP56O00567 594 aaKnown RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZBTB39O15060 712 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 CETN3O15182 167 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 ATXN7O15265 892 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 GCNT3O95395 438 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 GGPS1O95749 300 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 PGK2P07205 417 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 VSIG8P0DPA2 414 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 PLS3P13797 630 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 PTGS1P23219 599 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 SFPQP23246 707 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 ADORA2AP29274 412 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 MTIF2P46199 727 aaKnown RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 RARRES1P49788 294 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 SLC26A2P50443 739 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 RTP1P59025 263 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 UBXN1Q04323 297 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 RAD51AP2Q09MP3 1159 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 TBX2Q13207 712 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 LAMC2Q13753 1193 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 UBAP2LQ14157 1087 aaKnown RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 MYBPC2Q14324 1141 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 KRT31Q15323 416 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 LRRC41Q15345 812 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 TAF1CQ15572 869 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 NFIL3Q16649 462 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZNF792Q3KQV3 632 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZCWPW2Q504Y3 356 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 ODR4Q5SWX8 454 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 CELF3Q5SZQ8 465 aaKnown RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 FKBP15Q5T1M5 1219 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 MAMDC4Q6UXC1 1216 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 CYFIP1Q7L576 1253 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 APTXQ7Z2E3 356 aaKnown RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZNF720Q7Z2F6 126 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 DPP9Q86TI2 863 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 SFR1Q86XK3 245 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 RASAL3Q86YV0 1011 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 IRF2BP1Q8IU81 584 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 ETFBKMTQ8IXQ9 262 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 FAM178BQ8IXR5 827 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 DHX37Q8IY37 1157 aaKnown RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 SYCP3Q8IZU3 236 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 HELQQ8TDG4 1101 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 AFAP1L1Q8TED9 768 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 TMEM174Q8WUU8 243 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 SCFD1Q8WVM8 642 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 SEPT1Q8WYJ6 367 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 HPS3Q969F9 1004 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 HVCN1Q96D96 273 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 CCDC51Q96ER9 411 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 CEP170P1Q96L14 293 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 IFT74Q96LB3 600 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 CNOT6LQ96LI5 555 aaKnown RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 NAP1L5Q96NT1 182 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 PTPN18Q99952 460 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 JPH2Q9BR39 696 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 TUBGCP2Q9BSJ2 902 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 NUP58Q9BVL2 599 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 CFHR5Q9BXR6 569 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 PORCNQ9H237 461 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 SEMA6BQ9H3T3 888 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 ST6GALNAC4Q9H4F1 302 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 AZI2Q9H6S1 392 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 TMEM206Q9H813 350 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 EFCC1Q9HA90 598 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZFYVE28Q9HCC9 887 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 METTL14Q9HCE5 456 aaKnown RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZNF302Q9NR11 478 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 TYW1Q9NV66 732 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms