RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 CWF19L1Q69YN2 538 aaKnown RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 LRIG3Q6UXM1 1119 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 DDX42Q86XP3 938 aaKnown RBP eCLIP6.78□□□□□ -1.32
BDNF-211ENST00000439476 LARGE2Q8N3Y3 721 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 GDAP1Q8TB36 358 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 HDAC7Q8WUI4 952 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 CNKSR1Q969H4 720 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 KIAA1586Q9HCI6 787 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 SLC40A1Q9NP59 571 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 FAM53CQ9NYF3 392 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 TBK1Q9UHD2 729 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 CCPG1Q9ULG6 757 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 TMA7Q9Y2S6 64 aaKnown RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 IQANK1A0A1B0GTG1 560 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 LRRC10BA6NIK2 292 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 MCF2LO15068 1137 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 MAPK13O15264 365 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 HNRNPCL1O60812 293 aaKnown RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 ACSL3O95573 720 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 ACTN1P12814 892 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 KLRC1P26715 233 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 MAPK4P31152 587 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 CDK8P49336 464 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 PLCB4Q15147 1175 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 SGO2Q562F6 1265 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 FAM102BQ5T8I3 360 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 PCGF5Q86SE9 256 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 TTC39CQ8N584 583 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 GLG1Q92896 1179 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 NRBF2Q96F24 287 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 DDX27Q96GQ7 796 aaKnown RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 SEC16BQ96JE7 1060 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 NR1H4Q96RI1 486 aaPredicted RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 EHD4Q9H223 541 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 ANAPC5Q9UJX4 755 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 FAF1Q9UNN5 650 aaPredicted RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 JCADQ9P266 1359 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 BAZ2BQ9UIF8 2168 aaKnown RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 CAPN9O14815 690 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 WDR46O15213 610 aaKnown RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 PARNO95453 639 aaKnown RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 ABL1P00519 1130 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 CYP19A1P11511 503 aaPredicted RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 MSH2P43246 934 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 ZNF211Q13398 564 aaPredicted RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 PSMD6Q15008 389 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 FAM160B2Q86V87 743 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 SNRNP27Q8WVK2 155 aaKnown RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 TTC1Q99614 292 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 GORASP1Q9BQQ3 440 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 PAGR1Q9BTK6 254 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.78□□□□□ -1.32
BDNF-211ENST00000439476 A1CFQ9NQ94 594 aaKnown RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 hCG_2014768A0A024R1R8 64 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 MYMKA6NI61 221 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 UBAP1LF5GYI3 381 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 SUPT3HO75486 399 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 BBOX1O75936 387 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 TDP2O95551 362 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 GGPS1O95749 300 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 PMS1P54277 932 aaKnown RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 PDE1BQ01064 536 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 MKRN3Q13064 507 aaKnown RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 PTK7Q13308 1070 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 NAB2Q15742 525 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 PKN1Q16512 942 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 FIGNQ5HY92 759 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 TEDDM1Q5T9Z0 273 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 SLFN12LQ6IEE8 588 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 SH3RF1Q7Z6J0 888 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 USP38Q8NB14 1042 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 FLCNQ8NFG4 579 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 SPIRE2Q8WWL2 714 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 ZNF653Q96CK0 615 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 GRAMD1AQ96CP6 724 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 CORO1BQ9BR76 489 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 HSD3B7Q9H2F3 369 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 SLAIN2Q9P270 581 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 MINPP1Q9UNW1 487 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 POC1B-GALNT4F8VUJ3 575 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 AHCYL1O43865 530 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 MT-ND3P03897 115 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 HSPA1AP0DMV8 641 aaKnown RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 HSPA1BP0DMV9 641 aaKnown RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 KRT10P13645 584 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 NEK2P51955 445 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 GTF2IP78347 998 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 CDK17Q00537 523 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 COBLL1Q53SF7 1204 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 PACS1Q6VY07 963 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 KCTD1Q719H9 257 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 CENPUQ71F23 418 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 SH3RF3Q8TEJ3 882 aaPredicted RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 CASKIN2Q8WXE0 1202 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 C8orf37Q96NL8 207 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 ISCUQ9H1K1 167 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 ARHGAP20Q9P2F6 1191 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 ARIH1Q9Y4X5 557 aaPredicted RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 PFASO15067 1338 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 MYO5BQ9ULV0 1848 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms