RNA–Protein interactions for RNA: ENST00000438015.5

CHEK1-204, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHEK1, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-204ENST00000438015 PPFIA2O75334 1257 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 PYGMP11217 842 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 SKIP12755 728 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 SERPINB4P48594 390 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 ATXN3P54252 364 aaPredicted RBP11.74□□□□□ -0.53
CHEK1-204ENST00000438015 SPARCL1Q14515 664 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 XKR9Q5GH70 373 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 ERMARDQ5T6L9 678 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 BZW1Q7L1Q6 419 aaKnown RBP11.74□□□□□ -0.53
CHEK1-204ENST00000438015 PALB2Q86YC2 1186 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 RHOT2Q8IXI1 618 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 TEKT4Q8WW24 435 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 SPOCK2Q92563 424 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 KAT5Q92993 513 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 RBM15Q96T37 977 aaKnown RBP eCLIP11.74□□□□□ -0.539e-7■■■■□ 22.2
CHEK1-204ENST00000438015 MKNK1Q9BUB5 465 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 PHF2O75151 1096 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 TRPA1O75762 1119 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 NOP14P78316 857 aaKnown RBP11.74□□□□□ -0.53
CHEK1-204ENST00000438015 COG7P83436 770 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 GPS1Q13098 491 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 MIER3Q7Z3K6 550 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 SDCCAG8Q86SQ7 713 aaPredicted RBP11.74□□□□□ -0.53
CHEK1-204ENST00000438015 PIP4K2CQ8TBX8 421 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 RUBCNQ92622 972 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 PURBQ96QR8 312 aaKnown RBP11.74□□□□□ -0.53
CHEK1-204ENST00000438015 DDX50Q9BQ39 737 aaKnown RBP11.74□□□□□ -0.53
CHEK1-204ENST00000438015 ZNF577Q9BSK1 485 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 AGAP1Q9UPQ3 857 aa11.74□□□□□ -0.53
CHEK1-204ENST00000438015 TCRBV7S2A1N4TA0A589 114 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 TESPA1A2RU30 521 aaPredicted RBP11.73□□□□□ -0.53
CHEK1-204ENST00000438015 HNRNPDLO14979 420 aaKnown RBP11.73□□□□□ -0.53
CHEK1-204ENST00000438015 SLC16A4O15374 487 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 PFDN1O60925 122 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 PIK3CAP42336 1068 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 CPNE8Q86YQ8 564 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 NEDD1Q8NHV4 660 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 P3H4Q92791 437 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 SH3GL3Q99963 347 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 SPZ1Q9BXG8 430 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 SLC13A1Q9BZW2 595 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 JMJD4Q9H9V9 463 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 TMOD2Q9NZR1 351 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 ANKFY1Q9P2R3 1169 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHEK1-204ENST00000438015 MAD1L1Q9Y6D9 718 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 PDIA5Q14554 519 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 SEPT2Q15019 361 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 RBM46Q8TBY0 533 aaKnown RBP11.73□□□□□ -0.53
CHEK1-204ENST00000438015 RSAD2Q8WXG1 361 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 DNAJC9Q8WXX5 260 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 TRABDQ9H4I3 376 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 FAM187AA6NFU0 413 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 FECHP22830 423 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 KLC1Q07866 573 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 ITPK1Q13572 414 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 DHX34Q14147 1143 aaKnown RBP11.73□□□□□ -0.53
CHEK1-204ENST00000438015 YTHDF3Q7Z739 585 aaKnown RBP11.73□□□□□ -0.53
CHEK1-204ENST00000438015 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.73□□□□□ -0.53
CHEK1-204ENST00000438015 CCT6BQ92526 530 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 SLC5A5Q92911 643 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 EIF2AK1Q9BQI3 630 aaKnown RBP11.73□□□□□ -0.53
CHEK1-204ENST00000438015 TMEM117Q9H0C3 514 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 DBNDD1Q9H9R9 158 aa11.73□□□□□ -0.53
CHEK1-204ENST00000438015 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.73□□□□□ -0.53
CHEK1-204ENST00000438015 NTSR2O95665 410 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 IRX1P78414 480 aaPredicted RBP11.72□□□□□ -0.53
CHEK1-204ENST00000438015 PDIA2Q13087 525 aaKnown RBP11.72□□□□□ -0.53
CHEK1-204ENST00000438015 P3H1Q32P28 736 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 LIN9Q5TKA1 542 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 PHLDB3Q6NSJ2 640 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 FRMD5Q7Z6J6 570 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 NT5C1BQ96P26 610 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 IMPG2Q9BZV3 1241 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 ZWILCHQ9H900 591 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 APEX2Q9UBZ4 518 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 MYH13Q9UKX3 1938 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 I3L4J1 428 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 SNX3O60493 162 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 SGPL1O95470 568 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 RFC5P40937 340 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 DDR1Q08345 913 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 RCN1Q15293 331 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 CLUL1Q15846 466 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 SLC25A41Q8N5S1 370 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 SYT2Q8N9I0 419 aaPredicted RBP11.72□□□□□ -0.53
CHEK1-204ENST00000438015 AGR3Q8TD06 166 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 RAB20Q9NX57 234 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 MAP3K7O43318 606 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 RIPK2O43353 540 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 ZBED4O75132 1171 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 CAMTA2O94983 1202 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 KRT10P13645 584 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 KCNA3P22001 575 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 COILP38432 576 aaPredicted RBP11.72□□□□□ -0.53
CHEK1-204ENST00000438015 GRAMD1BQ3KR37 738 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.72□□□□□ -0.53
CHEK1-204ENST00000438015 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 FBXO41Q8TF61 875 aa11.72□□□□□ -0.53
CHEK1-204ENST00000438015 PYROXD1Q8WU10 500 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms