RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 PUM1Q14671 1186 aaKnown RBP eCLIP16.58■□□□□ 0.24
HDAC8-213ENST00000436675 KIAA0319Q5VV43 1072 aa16.58■□□□□ 0.24
HDAC8-213ENST00000436675 DCLRE1AQ6PJP8 1040 aa16.58■□□□□ 0.24
HDAC8-213ENST00000436675 SKAP1Q86WV1 359 aa16.58■□□□□ 0.24
HDAC8-213ENST00000436675 C1orf210Q8IVY1 113 aa16.58■□□□□ 0.24
HDAC8-213ENST00000436675 COLGALT2Q8IYK4 626 aa16.58■□□□□ 0.24
HDAC8-213ENST00000436675 PRPF31Q8WWY3 499 aaKnown RBP16.58■□□□□ 0.24
HDAC8-213ENST00000436675 GAD1Q99259 594 aa16.58■□□□□ 0.24
HDAC8-213ENST00000436675 APOL6Q9BWW8 343 aa16.58■□□□□ 0.24
HDAC8-213ENST00000436675 RNF39Q9H2S5 420 aa16.58■□□□□ 0.24
HDAC8-213ENST00000436675 SSX2IPQ9Y2D8 614 aa16.58■□□□□ 0.24
HDAC8-213ENST00000436675 CNTNAP2Q9UHC6 1331 aa16.58■□□□□ 0.24
HDAC8-213ENST00000436675 COL4A3Q01955 1670 aa16.58■□□□□ 0.24
HDAC8-213ENST00000436675 GAS2O43903 313 aaKnown RBP16.57■□□□□ 0.24
HDAC8-213ENST00000436675 GLULP15104 373 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 RPL17P18621 184 aaKnown RBP16.57■□□□□ 0.24
HDAC8-213ENST00000436675 MLH1P40692 756 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 PSMC5P62195 406 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 TSGA10IPQ3SY00 556 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 Q4G0T1 1027 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 PHLDB3Q6NSJ2 640 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 ZC3H14Q6PJT7 736 aaKnown RBP16.57■□□□□ 0.24
HDAC8-213ENST00000436675 B3GNT9Q6UX72 402 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 SMG8Q8ND04 991 aaKnown RBP16.57■□□□□ 0.24
HDAC8-213ENST00000436675 RUBCNQ92622 972 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 RABGGTAQ92696 567 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 JPH2Q9BR39 696 aaPredicted RBP16.57■□□□□ 0.24
HDAC8-213ENST00000436675 RPP25Q9BUL9 199 aaKnown RBP16.57■□□□□ 0.24
HDAC8-213ENST00000436675 EIF2AQ9BY44 585 aaKnown RBP16.57■□□□□ 0.24
HDAC8-213ENST00000436675 NT5C3AQ9H0P0 336 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 RXFP1Q9HBX9 757 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 NCOA5Q9HCD5 579 aaKnown RBP16.57■□□□□ 0.24
HDAC8-213ENST00000436675 MIOSQ9NXC5 875 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 DLGAP2Q9P1A6 1054 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 DPP7Q9UHL4 492 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 HES2Q9Y543 173 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 NUMBLQ9Y6R0 609 aa16.57■□□□□ 0.24
HDAC8-213ENST00000436675 ARL5CA6NH57 179 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 EML1O00423 815 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 TGM5O43548 720 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 NCLP19338 710 aaKnown RBP16.56■□□□□ 0.24
HDAC8-213ENST00000436675 SCNN1GP51170 649 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 CCT2P78371 535 aaKnown RBP16.56■□□□□ 0.24
HDAC8-213ENST00000436675 LAMTOR4Q0VGL1 99 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 HTR4Q13639 388 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 NTRK3Q16288 839 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 RSPO4Q2I0M5 234 aaPredicted RBP16.56■□□□□ 0.24
HDAC8-213ENST00000436675 CYP26C1Q6V0L0 522 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 SRGAP1Q7Z6B7 1085 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 SLC7A3Q8WY07 619 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 NXPE3Q969Y0 559 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 CPB2Q96IY4 423 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 CEP170P1Q96L14 293 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 ZFP42Q96MM3 310 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 JAKMIP1Q96N16 626 aaKnown RBP16.56■□□□□ 0.24
HDAC8-213ENST00000436675 SLKQ9H2G2 1235 aaPredicted RBP16.56■□□□□ 0.24
HDAC8-213ENST00000436675 IPPQ9Y573 584 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 ACACBO00763 2458 aa16.56■□□□□ 0.24
HDAC8-213ENST00000436675 HMGB1P09429 215 aaKnown RBP16.55■□□□□ 0.24
HDAC8-213ENST00000436675 DSG1Q02413 1049 aa16.55■□□□□ 0.24
HDAC8-213ENST00000436675 RNF149Q8NC42 400 aa16.55■□□□□ 0.24
HDAC8-213ENST00000436675 PJA1Q8NG27 643 aa16.55■□□□□ 0.24
HDAC8-213ENST00000436675 ETNPPLQ8TBG4 499 aa16.55■□□□□ 0.24
HDAC8-213ENST00000436675 PSPC1Q8WXF1 523 aaKnown RBP16.55■□□□□ 0.24
HDAC8-213ENST00000436675 RNF26Q9BY78 433 aaPredicted RBP16.55■□□□□ 0.24
HDAC8-213ENST00000436675 GPR62Q9BZJ7 368 aa16.55■□□□□ 0.24
HDAC8-213ENST00000436675 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.55■□□□□ 0.24
HDAC8-213ENST00000436675 ANHXE9PGG2 379 aa16.54■□□□□ 0.24
HDAC8-213ENST00000436675 ERLIN2O94905 339 aa16.54■□□□□ 0.24
HDAC8-213ENST00000436675 QARSP47897 775 aaKnown RBP16.54■□□□□ 0.24
HDAC8-213ENST00000436675 GPC5P78333 572 aa16.54■□□□□ 0.24
HDAC8-213ENST00000436675 NTHL1P78549 312 aa16.54■□□□□ 0.24
HDAC8-213ENST00000436675 SNW1Q13573 536 aaKnown RBP16.54■□□□□ 0.24
HDAC8-213ENST00000436675 RNF168Q8IYW5 571 aaPredicted RBP16.54■□□□□ 0.24
HDAC8-213ENST00000436675 MAML2Q8IZL2 1156 aaPredicted RBP16.54■□□□□ 0.24
HDAC8-213ENST00000436675 COLEC11Q9BWP8 271 aa16.54■□□□□ 0.24
HDAC8-213ENST00000436675 RHOBTB2Q9BYZ6 727 aa16.54■□□□□ 0.24
HDAC8-213ENST00000436675 PRKD2Q9BZL6 878 aa16.54■□□□□ 0.24
HDAC8-213ENST00000436675 PLEKHA4Q9H4M7 779 aa16.54■□□□□ 0.24
HDAC8-213ENST00000436675 UBN1Q9NPG3 1134 aa16.54■□□□□ 0.24
HDAC8-213ENST00000436675 SPATA6Q9NWH7 488 aaPredicted RBP16.54■□□□□ 0.24
HDAC8-213ENST00000436675 WRAP73Q9P2S5 460 aaPredicted RBP16.54■□□□□ 0.24
HDAC8-213ENST00000436675 DDX25Q9UHL0 483 aaKnown RBP16.54■□□□□ 0.24
HDAC8-213ENST00000436675 PCDHA4Q9UN74 947 aa16.54■□□□□ 0.24
HDAC8-213ENST00000436675 ARID2Q68CP9 1835 aa16.54■□□□□ 0.24
HDAC8-213ENST00000436675 KMT2BQ9UMN6 2715 aaPredicted RBP16.53■□□□□ 0.24
HDAC8-213ENST00000436675 CYP3A7-CYP3A51PA0A087WV96 503 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 SLC37A4O43826 429 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 KINO60870 393 aaKnown RBP16.53■□□□□ 0.24
HDAC8-213ENST00000436675 NR1I2O75469 434 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 KRT37O76014 449 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 EFEMP2O95967 443 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 FSHRP23945 695 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 CYP3A7P24462 503 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 DSC1Q08554 894 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 FUT10Q6P4F1 479 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 PRSS55Q6UWB4 352 aaPredicted RBP16.53■□□□□ 0.24
HDAC8-213ENST00000436675 PARM1Q6UWI2 310 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 GRASPQ7Z6J2 395 aaPredicted RBP16.53■□□□□ 0.24
HDAC8-213ENST00000436675 SUMF1Q8NBK3 374 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms