RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 EMILIN2Q9BXX0 1053 aa12.22□□□□□ -0.45
SPTLC1P4-201ENST00000435997 EIF2AQ9BY44 585 aaKnown RBP12.22□□□□□ -0.45
SPTLC1P4-201ENST00000435997 NFKBIZQ9BYH8 718 aa12.22□□□□□ -0.45
SPTLC1P4-201ENST00000435997 BMP2KQ9NSY1 1161 aaPredicted RBP12.22□□□□□ -0.45
SPTLC1P4-201ENST00000435997 LIMD1Q9UGP4 676 aa12.22□□□□□ -0.45
SPTLC1P4-201ENST00000435997 FAM205CA6NFA0 338 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 ZBTB39O15060 712 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 ASAP2O43150 1006 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 GFRA3O60609 400 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 SLITRK3O94933 977 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 POMCP01189 267 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 XBP1P17861 261 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 AXLP30530 894 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 MLH1P40692 756 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 NBL1P41271 181 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 CYP4A11Q02928 519 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 MBTD1Q05BQ5 628 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 MXD4Q14582 209 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 ASTLQ6HA08 431 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 NOTUMQ6P988 496 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 OTUD6AQ7L8S5 288 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 SLFN12Q8IYM2 578 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 GSTCDQ8NEC7 633 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 DYDC2Q96IM9 177 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 RPS6KC1Q96S38 1066 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 HSD17B14Q9BPX1 270 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 SLKQ9H2G2 1235 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 RXFP1Q9HBX9 757 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 UBN1Q9NPG3 1134 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 MRPL17Q9NRX2 175 aaKnown RBP12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 DUSP12Q9UNI6 340 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 FAN1Q9Y2M0 1017 aa12.21□□□□□ -0.45
SPTLC1P4-201ENST00000435997 CFAP54Q96N23 3096 aa12.21□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ARL5CA6NH57 179 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 F8W810 466 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 H0Y858 1186 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 TEX28O15482 410 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 N4BP1O75113 896 aaKnown RBP12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ERLIN2O94905 339 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 C1RP00736 705 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ALDH2P05091 517 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 URODP06132 367 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 FDPSP14324 419 aaKnown RBP12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 KLRC2P26717 231 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ARL2P36404 184 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 CLCN5P51795 746 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 DSG1Q02413 1049 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 NR5A1Q13285 461 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 CAPSQ13938 189 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 CTTNQ14247 550 aaKnown RBP12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 XKR9Q5GH70 373 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 KIAA0319Q5VV43 1072 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 NCAPH2Q6IBW4 605 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 OTOP3Q7RTS5 596 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 GPR65Q8IYL9 337 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 TMEM87AQ8NBN3 555 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ASAP3Q8TDY4 903 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ATOH1Q92858 354 aaPredicted RBP12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ZFP42Q96MM3 310 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 GAD1Q99259 594 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 CSRNP2Q9H175 543 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 MAN1C1Q9NR34 630 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 CHST7Q9NS84 486 aa12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 PRG3Q9Y2Y8 225 aaPredicted RBP12.2□□□□□ -0.46
SPTLC1P4-201ENST00000435997 PLXNA3P51805 1871 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 WNT7AO00755 349 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 DGAT1O75907 488 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 SSBP05455 408 aaKnown RBP eCLIP12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ADH1AP07327 375 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ITGA4P13612 1032 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 NPR3P17342 541 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ARF4P18085 180 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 GLRA2P23416 452 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 KRT2P35908 639 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 RARRES1P49788 294 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 SCNN1GP51170 649 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ANAPC15P60006 121 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 CYP26C1Q6V0L0 522 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 TAS1R1Q7RTX1 841 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ZNF707Q96C28 371 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ACSF2Q96CM8 615 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 CPB2Q96IY4 423 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 FAM193BQ96PV7 902 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 EIF2AK1Q9BQI3 630 aaKnown RBP12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 NXF3Q9H4D5 531 aaKnown RBP12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 KCNK12Q9HB15 430 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 WDR6Q9NNW5 1121 aaKnown RBP12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ANKEF1Q9NU02 776 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 MIOSQ9NXC5 875 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ORC3Q9UBD5 711 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 SSX2IPQ9Y2D8 614 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 GIT1Q9Y2X7 761 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 HES2Q9Y543 173 aa12.19□□□□□ -0.46
SPTLC1P4-201ENST00000435997 CLUHO75153 1309 aa12.18□□□□□ -0.46
SPTLC1P4-201ENST00000435997 B4GALT5O43286 388 aa12.18□□□□□ -0.46
SPTLC1P4-201ENST00000435997 DTNBO60941 627 aa12.18□□□□□ -0.46
SPTLC1P4-201ENST00000435997 GLUD1P00367 558 aa12.18□□□□□ -0.46
SPTLC1P4-201ENST00000435997 GLUD2P49448 558 aa12.18□□□□□ -0.46
SPTLC1P4-201ENST00000435997 AK2P54819 239 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms