RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 NOTUMQ6P988 496 aa18.08■□□□□ 0.48
PTPRA-206ENST00000430705 TRIM67Q6ZTA4 783 aa18.08■□□□□ 0.48
PTPRA-206ENST00000430705 COLGALT2Q8IYK4 626 aa18.08■□□□□ 0.48
PTPRA-206ENST00000430705 RNF168Q8IYW5 571 aaPredicted RBP18.08■□□□□ 0.48
PTPRA-206ENST00000430705 GSTCDQ8NEC7 633 aa18.08■□□□□ 0.48
PTPRA-206ENST00000430705 BSNDQ8WZ55 320 aa18.08■□□□□ 0.48
PTPRA-206ENST00000430705 CCDC51Q96ER9 411 aa18.08■□□□□ 0.48
PTPRA-206ENST00000430705 C8orf76Q96K31 380 aa18.08■□□□□ 0.48
PTPRA-206ENST00000430705 GAD1Q99259 594 aa18.08■□□□□ 0.48
PTPRA-206ENST00000430705 LLPHQ9BRT6 129 aaKnown RBP18.08■□□□□ 0.48
PTPRA-206ENST00000430705 TMEM175Q9BSA9 504 aa18.08■□□□□ 0.48
PTPRA-206ENST00000430705 CSRNP2Q9H175 543 aa18.08■□□□□ 0.48
PTPRA-206ENST00000430705 ADAM7Q9H2U9 754 aa18.08■□□□□ 0.48
PTPRA-206ENST00000430705 TUFT1Q9NNX1 390 aa18.08■□□□□ 0.48
PTPRA-206ENST00000430705 C2orf16Q68DN1 1984 aa18.08■□□□□ 0.48
PTPRA-206ENST00000430705 ITGA4P13612 1032 aa18.07■□□□□ 0.48
PTPRA-206ENST00000430705 AXLP30530 894 aa18.07■□□□□ 0.48
PTPRA-206ENST00000430705 SCNN1GP51170 649 aa18.07■□□□□ 0.48
PTPRA-206ENST00000430705 TFDP1Q14186 410 aa18.07■□□□□ 0.48
PTPRA-206ENST00000430705 ZNF174Q15697 407 aa18.07■□□□□ 0.48
PTPRA-206ENST00000430705 ECM1Q16610 540 aa18.07■□□□□ 0.48
PTPRA-206ENST00000430705 RARS2Q5T160 578 aaKnown RBP18.07■□□□□ 0.48
PTPRA-206ENST00000430705 CDCA2Q69YH5 1023 aaPredicted RBP18.07■□□□□ 0.48
PTPRA-206ENST00000430705 TAS1R1Q7RTX1 841 aa18.07■□□□□ 0.48
PTPRA-206ENST00000430705 C4orf32Q8N8J7 132 aa18.07■□□□□ 0.48
PTPRA-206ENST00000430705 FBXO18Q8NFZ0 1043 aa18.07■□□□□ 0.48
PTPRA-206ENST00000430705 POLR3CQ9BUI4 534 aaPredicted RBP18.07■□□□□ 0.48
PTPRA-206ENST00000430705 FOXP1Q9H334 677 aaPredicted RBP18.07■□□□□ 0.48
PTPRA-206ENST00000430705 DBR1Q9UK59 544 aaKnown RBP18.07■□□□□ 0.48
PTPRA-206ENST00000430705 TMEM221A6NGB7 291 aa18.06■□□□□ 0.48
PTPRA-206ENST00000430705 C2CD4DB7Z1M9 353 aa18.06■□□□□ 0.48
PTPRA-206ENST00000430705 M0R296 226 aa18.06■□□□□ 0.48
PTPRA-206ENST00000430705 SSBP05455 408 aaKnown RBP eCLIP18.06■□□□□ 0.48
PTPRA-206ENST00000430705 OR52Z1P0C646 297 aa18.06■□□□□ 0.48
PTPRA-206ENST00000430705 XRCC6P12956 609 aaKnown RBP eCLIP18.06■□□□□ 0.48
PTPRA-206ENST00000430705 PTPN21Q16825 1174 aa18.06■□□□□ 0.48
PTPRA-206ENST00000430705 TPRNQ4KMQ1 711 aa18.06■□□□□ 0.48
PTPRA-206ENST00000430705 MAEAQ7L5Y9 396 aa18.06■□□□□ 0.48
PTPRA-206ENST00000430705 CNNM3Q8NE01 707 aa18.06■□□□□ 0.48
PTPRA-206ENST00000430705 ASIC4Q96FT7 647 aa18.06■□□□□ 0.48
PTPRA-206ENST00000430705 KLHL5Q96PQ7 755 aa18.06■□□□□ 0.48
PTPRA-206ENST00000430705 HERC2P3Q9BVR0 1158 aa18.06■□□□□ 0.48
PTPRA-206ENST00000430705 APOL6Q9BWW8 343 aa18.06■□□□□ 0.48
PTPRA-206ENST00000430705 PRG3Q9Y2Y8 225 aaPredicted RBP18.06■□□□□ 0.48
PTPRA-206ENST00000430705 CARNS1A5YM72 827 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 EIF5BO60841 1220 aaKnown RBP18.05■□□□□ 0.48
PTPRA-206ENST00000430705 NPTXRO95502 500 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 CNPP09543 421 aaKnown RBP18.05■□□□□ 0.48
PTPRA-206ENST00000430705 CLCN4P51793 760 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 ITIH3Q06033 890 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 ORC2Q13416 577 aaPredicted RBP18.05■□□□□ 0.48
PTPRA-206ENST00000430705 SAFBQ15424 915 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTPRA-206ENST00000430705 TTC38Q5R3I4 469 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 KIAA1841Q6NSI8 718 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 PPP4R3CPQ6ZMV5 832 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 BMP8AQ7Z5Y6 402 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 NOSTRINQ8IVI9 506 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 FBXL18Q96ME1 805 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 CCDC43Q96MW1 224 aaKnown RBP18.05■□□□□ 0.48
PTPRA-206ENST00000430705 CXCL16Q9H2A7 254 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 DZANK1Q9NVP4 752 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 KANSL3Q9P2N6 904 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 USP20Q9Y2K6 914 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 FAN1Q9Y2M0 1017 aa18.05■□□□□ 0.48
PTPRA-206ENST00000430705 A0A1B0GUA9 196 aa18.04■□□□□ 0.48
PTPRA-206ENST00000430705 LRRIQ4A6NIV6 560 aa18.04■□□□□ 0.48
PTPRA-206ENST00000430705 SOD2P04179 222 aa18.04■□□□□ 0.48
PTPRA-206ENST00000430705 AKAP5P24588 427 aa18.04■□□□□ 0.48
PTPRA-206ENST00000430705 RPA1P27694 616 aa18.04■□□□□ 0.48
PTPRA-206ENST00000430705 TOB1P50616 345 aaPredicted RBP18.04■□□□□ 0.48
PTPRA-206ENST00000430705 GIT2Q14161 759 aa18.04■□□□□ 0.48
PTPRA-206ENST00000430705 CCDC113Q9H0I3 377 aa18.04■□□□□ 0.48
PTPRA-206ENST00000430705 SMOC2Q9H3U7 446 aa18.04■□□□□ 0.48
PTPRA-206ENST00000430705 FZD8Q9H461 694 aa18.04■□□□□ 0.48
PTPRA-206ENST00000430705 UBN1Q9NPG3 1134 aa18.04■□□□□ 0.48
PTPRA-206ENST00000430705 CACNG4Q9UBN1 327 aa18.04■□□□□ 0.48
PTPRA-206ENST00000430705 USP34Q70CQ2 3546 aa18.04■□□□□ 0.48
PTPRA-206ENST00000430705 DMDP11532 3685 aa18.04■□□□□ 0.48
PTPRA-206ENST00000430705 MYO15AQ9UKN7 3530 aa18.03■□□□□ 0.48
PTPRA-206ENST00000430705 ALDH2P05091 517 aa18.03■□□□□ 0.48
PTPRA-206ENST00000430705 OR1G1P47890 313 aa18.03■□□□□ 0.48
PTPRA-206ENST00000430705 HMGN5P82970 282 aaKnown RBP18.03■□□□□ 0.48
PTPRA-206ENST00000430705 SIGLEC14Q08ET2 396 aa18.03■□□□□ 0.48
PTPRA-206ENST00000430705 SLC27A1Q6PCB7 646 aa18.03■□□□□ 0.48
PTPRA-206ENST00000430705 PADI6Q6TGC4 694 aa18.03■□□□□ 0.48
PTPRA-206ENST00000430705 MCPH1Q8NEM0 835 aa18.03■□□□□ 0.48
PTPRA-206ENST00000430705 NECTIN4Q96NY8 510 aa18.03■□□□□ 0.48
PTPRA-206ENST00000430705 FAM193BQ96PV7 902 aaPredicted RBP18.03■□□□□ 0.48
PTPRA-206ENST00000430705 NACC1Q96RE7 527 aa18.03■□□□□ 0.48
PTPRA-206ENST00000430705 PDZD7Q9H5P4 517 aa18.03■□□□□ 0.48
PTPRA-206ENST00000430705 TSHZ2Q9NRE2 1034 aa18.03■□□□□ 0.48
PTPRA-206ENST00000430705 GIT1Q9Y2X7 761 aa18.03■□□□□ 0.48
PTPRA-206ENST00000430705 ZMYM2Q9UBW7 1377 aa18.03■□□□□ 0.48
PTPRA-206ENST00000430705 C2CD2LO14523 706 aa18.02■□□□□ 0.48
PTPRA-206ENST00000430705 U2AF2P26368 475 aaKnown RBP eCLIP18.02■□□□□ 0.488e-8■□□□□ 11.2
PTPRA-206ENST00000430705 MTHFRP42898 656 aa18.02■□□□□ 0.48
PTPRA-206ENST00000430705 FXR2P51116 673 aaKnown RBP eCLIP18.02■□□□□ 0.48
PTPRA-206ENST00000430705 BMS1Q14692 1282 aaKnown RBP18.02■□□□□ 0.48
PTPRA-206ENST00000430705 FAM187BQ17R55 369 aa18.02■□□□□ 0.48
PTPRA-206ENST00000430705 KIAA0319Q5VV43 1072 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms