RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 MFAP3LO75121 409 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 FAM107AO95990 144 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 FESP07332 822 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 CCL5P13501 91 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 LSP1P33241 339 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 MTF1Q14872 753 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 NAA25Q14CX7 972 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 BRDTQ58F21 947 aaPredicted RBP12.38□□□□□ -0.43
CECR3-201ENST00000428828 GNASQ5JWF2 1037 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 PLA2G4FQ68DD2 849 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 ZNF572Q7Z3I7 529 aaPredicted RBP12.38□□□□□ -0.43
CECR3-201ENST00000428828 PPFIBP1Q86W92 1011 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 GRAMD1CQ8IYS0 662 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 PPP1R13LQ8WUF5 828 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 CAVIN3Q969G5 261 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 OSBPL9Q96SU4 736 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 RNF208Q9H0X6 261 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 SEPT9Q9UHD8 586 aaPredicted RBP12.38□□□□□ -0.43
CECR3-201ENST00000428828 TPX2Q9ULW0 747 aaKnown RBP12.38□□□□□ -0.43
CECR3-201ENST00000428828 Q9Y3F1 56 aa12.38□□□□□ -0.43
CECR3-201ENST00000428828 IGKV6D-21A0A0A0MT36 114 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 A6NJR5 290 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 PPP1R37O75864 691 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 GHRP10912 638 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 ERCC5P28715 1186 aaPredicted RBP12.37□□□□□ -0.43
CECR3-201ENST00000428828 AFMP43652 599 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 GJA9P57773 515 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 RIPK1Q13546 671 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 PKN2Q16513 984 aaKnown RBP12.37□□□□□ -0.43
CECR3-201ENST00000428828 NAALADL2Q58DX5 795 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 HYIQ5T013 277 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 CEP57Q86XR8 500 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 CD302Q8IX05 232 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 EHBP1Q8NDI1 1231 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 LMBR1Q8WVP7 490 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 LARP4BQ92615 738 aaKnown RBP12.37□□□□□ -0.43
CECR3-201ENST00000428828 CCDC43Q96MW1 224 aaKnown RBP12.37□□□□□ -0.43
CECR3-201ENST00000428828 DEFB118Q96PH6 123 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
CECR3-201ENST00000428828 CORO1CQ9ULV4 474 aaPredicted RBP12.37□□□□□ -0.43
CECR3-201ENST00000428828 MAFBQ9Y5Q3 323 aaPredicted RBP12.37□□□□□ -0.43
CECR3-201ENST00000428828 EMSYQ7Z589 1322 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 ACTN4O43707 911 aaKnown RBP12.37□□□□□ -0.43
CECR3-201ENST00000428828 MSCO60682 206 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 ADAMTS4O75173 837 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 COQ9O75208 318 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 LGR5O75473 907 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 DNAJC8O75937 253 aaPredicted RBP12.37□□□□□ -0.43
CECR3-201ENST00000428828 ATP4AP20648 1035 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 YWHABP31946 246 aaKnown RBP12.37□□□□□ -0.43
CECR3-201ENST00000428828 PTGISQ16647 500 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 SKIDA1Q1XH10 827 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 CCDC121Q6ZUS5 278 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 RAD54LQ92698 747 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 CCDC114Q96M63 670 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 CTAGE1Q96RT6 745 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 UPF3AQ9H1J1 476 aaKnown RBP12.37□□□□□ -0.43
CECR3-201ENST00000428828 BHMT2Q9H2M3 363 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 SMARCAD1Q9H4L7 1026 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 BLOC1S4Q9NUP1 217 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 DNM3Q9UQ16 869 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 TRPC6Q9Y210 931 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 SAR1BQ9Y6B6 198 aa12.37□□□□□ -0.43
CECR3-201ENST00000428828 SCN10AQ9Y5Y9 1956 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 ANO9A1A5B4 782 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 OATP04181 439 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 PLA2G4BP0C869 781 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 CASP1P29466 404 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 TRIM14Q14142 442 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 MTERF2Q49AM1 385 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 LHX8Q68G74 356 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 MFN1Q8IWA4 741 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 C4orf19Q8IY42 314 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 MMGT1Q8N4V1 131 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 SPDL1Q96EA4 605 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 ZNF333Q96JL9 665 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 NACC1Q96RE7 527 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 PYM1Q9BRP8 204 aaKnown RBP12.36□□□□□ -0.43
CECR3-201ENST00000428828 C16orf70Q9BSU1 422 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 HAUS4Q9H6D7 363 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 ERAP1Q9NZ08 941 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 STK17AQ9UEE5 414 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 NFE2L3Q9Y4A8 694 aa12.36□□□□□ -0.43
CECR3-201ENST00000428828 H3BRB1 525 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 DKC1O60832 514 aaKnown RBP eCLIP12.35□□□□□ -0.43
CECR3-201ENST00000428828 RAB27AP51159 221 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 EPHB4P54760 987 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 NPEPPSP55786 919 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 KCNA10Q16322 511 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 XKR9Q5GH70 373 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 CXCL17Q6UXB2 119 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 ANO5Q75V66 913 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 PLPPR4Q7Z2D5 763 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 RNF180Q86T96 592 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 NLRP14Q86W24 1093 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 MYCBPAPQ8TBZ2 947 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 ANKRD27Q96NW4 1050 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 CCT8L2Q96SF2 557 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 MCOLN1Q9GZU1 580 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 BLZF1Q9H2G9 400 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms