RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CNPP09543 421 aaKnown RBP17.26■□□□□ 0.35
SEC13-210ENST00000428626 ITGA4P13612 1032 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 MCM7P33993 719 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 MLH1P40692 756 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 ITIH3Q06033 890 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 POU5F1BQ06416 359 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 DSC1Q08554 894 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 SIGLEC14Q08ET2 396 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 ALYREFQ86V81 257 aaKnown RBP17.26■□□□□ 0.35
SEC13-210ENST00000428626 CATSPER3Q86XQ3 398 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 CCDC83Q8IWF9 413 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 GSTCDQ8NEC7 633 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 PRSS33Q8NF86 280 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 KLHL5Q96PQ7 755 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 TMEM175Q9BSA9 504 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 CSRNP2Q9H175 543 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 POLR3FQ9H1D9 316 aaPredicted RBP17.26■□□□□ 0.35
SEC13-210ENST00000428626 SMOC2Q9H3U7 446 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 NXF3Q9H4D5 531 aaKnown RBP17.26■□□□□ 0.35
SEC13-210ENST00000428626 TSHZ2Q9NRE2 1034 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 FAN1Q9Y2M0 1017 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 PRG3Q9Y2Y8 225 aaPredicted RBP17.26■□□□□ 0.35
SEC13-210ENST00000428626 CACNA1HO95180 2353 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 DENND4AQ7Z401 1863 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 TDRD15B5MCY1 1934 aaKnown RBP17.25■□□□□ 0.35
SEC13-210ENST00000428626 TTLL13PA6NNM8 815 aa17.25■□□□□ 0.35
SEC13-210ENST00000428626 PDGFBP01127 241 aaPredicted RBP17.25■□□□□ 0.35
SEC13-210ENST00000428626 ALDH2P05091 517 aa17.25■□□□□ 0.35
SEC13-210ENST00000428626 AXLP30530 894 aa17.25■□□□□ 0.35
SEC13-210ENST00000428626 SCNN1GP51170 649 aa17.25■□□□□ 0.35
SEC13-210ENST00000428626 ERICH6BQ5W0A0 696 aa17.25■□□□□ 0.35
SEC13-210ENST00000428626 NOTUMQ6P988 496 aa17.25■□□□□ 0.35
SEC13-210ENST00000428626 TMC5Q6UXY8 1006 aa17.25■□□□□ 0.35
SEC13-210ENST00000428626 MAEAQ7L5Y9 396 aa17.25■□□□□ 0.35
SEC13-210ENST00000428626 RNF168Q8IYW5 571 aaPredicted RBP17.25■□□□□ 0.35
SEC13-210ENST00000428626 KIF2CQ99661 725 aa17.25■□□□□ 0.35
SEC13-210ENST00000428626 APOL6Q9BWW8 343 aa17.25■□□□□ 0.35
SEC13-210ENST00000428626 KANSL3Q9P2N6 904 aa17.25■□□□□ 0.35
SEC13-210ENST00000428626 C2orf16Q68DN1 1984 aa17.25■□□□□ 0.35
SEC13-210ENST00000428626 PLXNA3P51805 1871 aa17.24■□□□□ 0.35
SEC13-210ENST00000428626 CLCN4P51793 760 aa17.24■□□□□ 0.35
SEC13-210ENST00000428626 VCPP55072 806 aaKnown RBP17.24■□□□□ 0.35
SEC13-210ENST00000428626 TRIM29Q14134 588 aa17.24■□□□□ 0.35
SEC13-210ENST00000428626 GIT2Q14161 759 aa17.24■□□□□ 0.35
SEC13-210ENST00000428626 TFDP1Q14186 410 aa17.24■□□□□ 0.35
SEC13-210ENST00000428626 PCBP1Q15365 356 aaKnown RBP eCLIP17.24■□□□□ 0.35
SEC13-210ENST00000428626 KIAA1841Q6NSI8 718 aa17.24■□□□□ 0.35
SEC13-210ENST00000428626 CES5AQ6NT32 575 aa17.24■□□□□ 0.35
SEC13-210ENST00000428626 CNNM3Q8NE01 707 aa17.24■□□□□ 0.35
SEC13-210ENST00000428626 BSNDQ8WZ55 320 aa17.24■□□□□ 0.35
SEC13-210ENST00000428626 CCDC51Q96ER9 411 aa17.24■□□□□ 0.35
SEC13-210ENST00000428626 NECTIN4Q96NY8 510 aa17.24■□□□□ 0.35
SEC13-210ENST00000428626 FAM193BQ96PV7 902 aaPredicted RBP17.24■□□□□ 0.35
SEC13-210ENST00000428626 NFKBIZQ9BYH8 718 aa17.24■□□□□ 0.35
SEC13-210ENST00000428626 KCNH6Q9H252 994 aa17.24■□□□□ 0.35
SEC13-210ENST00000428626 DZANK1Q9NVP4 752 aa17.24■□□□□ 0.35
SEC13-210ENST00000428626 CARNS1A5YM72 827 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 C2CD2LO14523 706 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 BRD1O95696 1058 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 SOD2P04179 222 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 EDN1P05305 212 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 ASGR2P07307 311 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 AKAP5P24588 427 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 MTHFRP42898 656 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 OR1G1P47890 313 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 BMS1Q14692 1282 aaKnown RBP17.23■□□□□ 0.35
SEC13-210ENST00000428626 ZNF174Q15697 407 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 POTEGQ6S5H5 508 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 FBXL6Q8N531 539 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 KREMEN2Q8NCW0 462 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 PHOX2BQ99453 314 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 CXCL16Q9H2A7 254 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 CACNG4Q9UBN1 327 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 LIMCH1Q9UPQ0 1083 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 USP20Q9Y2K6 914 aa17.23■□□□□ 0.35
SEC13-210ENST00000428626 A0A1B0GUA9 196 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 NPTXRO95502 500 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 XRCC6P12956 609 aaKnown RBP eCLIP17.22■□□□□ 0.35
SEC13-210ENST00000428626 KLRC2P26717 231 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 NBR1Q14596 966 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 ECM1Q16610 540 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 KIAA0319Q5VV43 1072 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 CABP7Q86V35 215 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 C4orf32Q8N8J7 132 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 TMEM87AQ8NBN3 555 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 RABGGTAQ92696 567 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 C8orf76Q96K31 380 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 B3GALT6Q96L58 329 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 RIPOR3Q96MK2 946 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 HERC2P3Q9BVR0 1158 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 POLD4Q9HCU8 107 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 TUFT1Q9NNX1 390 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 UBN1Q9NPG3 1134 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 KLK14Q9P0G3 267 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 NR2E1Q9Y466 385 aa17.22■□□□□ 0.35
SEC13-210ENST00000428626 LRRIQ4A6NIV6 560 aa17.21■□□□□ 0.35
SEC13-210ENST00000428626 TEX28O15482 410 aa17.21■□□□□ 0.35
SEC13-210ENST00000428626 MYBP10242 640 aa17.21■□□□□ 0.35
SEC13-210ENST00000428626 TCF15Q12870 199 aa17.21■□□□□ 0.35
SEC13-210ENST00000428626 ATAT1Q5SQI0 421 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms