RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 PHEXP78562 749 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 PPATQ06203 517 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 ITGA9Q13797 1035 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 FAM47EQ6ZV65 393 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 KBTBD2Q8IY47 623 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.22■□□□□ 0.35
C9orf3-206ENST00000428313 MAML3Q96JK9 1138 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 SMC6Q96SB8 1091 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 PICK1Q9NRD5 415 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 ZFP69BQ9UJL9 534 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 PAIP2BQ9ULR5 123 aaKnown RBP17.22■□□□□ 0.35
C9orf3-206ENST00000428313 A8MXQ7 604 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 GGPS1O95749 300 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 PCP11498 1178 aaKnown RBP17.21■□□□□ 0.35
C9orf3-206ENST00000428313 IDO1P14902 403 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 VCAM1P19320 739 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 CTNNA2P26232 953 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 COPB2P35606 906 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 CCDC174Q6PII3 467 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 ZNF554Q86TJ5 538 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 MYOCDQ8IZQ8 938 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 SPATA5Q8NB90 893 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 SLC35B4Q969S0 331 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 C18orf8Q96DM3 657 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 BTBD10Q9BSF8 475 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 PTTG2Q9NZH5 202 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 TUBGCP4Q9UGJ1 667 aa17.21■□□□□ 0.35
C9orf3-206ENST00000428313 A0A0J9YVX5 310 aa17.21■□□□□ 0.34
C9orf3-206ENST00000428313 TRAF5O00463 557 aa17.21■□□□□ 0.34
C9orf3-206ENST00000428313 MUTP22033 750 aa17.21■□□□□ 0.34
C9orf3-206ENST00000428313 R3HDM1Q15032 1099 aaKnown RBP17.21■□□□□ 0.34
C9orf3-206ENST00000428313 SLC4A8Q2Y0W8 1093 aa17.21■□□□□ 0.34
C9orf3-206ENST00000428313 TAF1BQ53T94 588 aaPredicted RBP17.21■□□□□ 0.34
C9orf3-206ENST00000428313 DPY19L2P1Q6NXN4 242 aa17.21■□□□□ 0.34
C9orf3-206ENST00000428313 ZNF398Q8TD17 642 aa17.21■□□□□ 0.34
C9orf3-206ENST00000428313 RFFLQ8WZ73 363 aa17.21■□□□□ 0.34
C9orf3-206ENST00000428313 CCDC97Q96F63 343 aaPredicted RBP17.21■□□□□ 0.34
C9orf3-206ENST00000428313 DDX50Q9BQ39 737 aaKnown RBP17.21■□□□□ 0.34
C9orf3-206ENST00000428313 ISCA1Q9BUE6 129 aa17.21■□□□□ 0.34
C9orf3-206ENST00000428313 LRRC27Q9C0I9 530 aa17.21■□□□□ 0.34
C9orf3-206ENST00000428313 PPP1R9AQ9ULJ8 1098 aa17.21■□□□□ 0.34
C9orf3-206ENST00000428313 PCDHA6Q9UN73 950 aa17.21■□□□□ 0.34
C9orf3-206ENST00000428313 AXIN2Q9Y2T1 843 aa17.21■□□□□ 0.34
C9orf3-206ENST00000428313 SH3GLB1Q9Y371 365 aa17.21■□□□□ 0.34
C9orf3-206ENST00000428313 PCDHA8Q9Y5H6 950 aa17.21■□□□□ 0.34
C9orf3-206ENST00000428313 C2CD2LO14523 706 aa17.2■□□□□ 0.34
C9orf3-206ENST00000428313 RGS2P41220 211 aa17.2■□□□□ 0.34
C9orf3-206ENST00000428313 DSG1Q02413 1049 aa17.2■□□□□ 0.34
C9orf3-206ENST00000428313 INF2Q27J81 1249 aa17.2■□□□□ 0.34
C9orf3-206ENST00000428313 CERKLQ49MI3 558 aaPredicted RBP17.2■□□□□ 0.34
C9orf3-206ENST00000428313 TBC1D9BQ66K14 1250 aa17.2■□□□□ 0.34
C9orf3-206ENST00000428313 ANKRD35Q8N283 1001 aa17.2■□□□□ 0.34
C9orf3-206ENST00000428313 PPP2R3CQ969Q6 453 aa17.2■□□□□ 0.34
C9orf3-206ENST00000428313 METTL5Q9NRN9 209 aaKnown RBP17.2■□□□□ 0.34
C9orf3-206ENST00000428313 CHMP2BQ9UQN3 213 aa17.2■□□□□ 0.34
C9orf3-206ENST00000428313 FAM47DPA6NHR8 397 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 EDF1O60869 148 aaKnown RBP17.19■□□□□ 0.34
C9orf3-206ENST00000428313 E2F6O75461 281 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 ZNF189O75820 626 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-206ENST00000428313 ETS2P15036 469 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 LDHAL6AQ6ZMR3 332 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 ADAT2Q7Z6V5 191 aaKnown RBP17.19■□□□□ 0.34
C9orf3-206ENST00000428313 CCDC125Q86Z20 511 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 RASGRP4Q8TDF6 673 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 WDR60Q8WVS4 1066 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 CLMNQ96JQ2 1002 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 BLOC1S4Q9NUP1 217 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 BAZ2BQ9UIF8 2168 aaKnown RBP17.19■□□□□ 0.34
C9orf3-206ENST00000428313 FAM196BA6NMK8 535 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 GSC2O15499 205 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 ASMTLO95671 621 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 TMEM253P0C7T8 217 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 VEGFAP15692 232 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-206ENST00000428313 PLCG2P16885 1265 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 CTC1Q2NKJ3 1217 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 USH1GQ495M9 461 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 PRELID2Q8N945 189 aa17.19■□□□□ 0.34
C9orf3-206ENST00000428313 MINDY4BA8MYZ0 360 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 MAFGO15525 162 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 PDE8BO95263 885 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 FGRP09769 529 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 UCHL3P15374 230 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 ZFXP17010 805 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-206ENST00000428313 CRABP2P29373 138 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 NEK3P51956 506 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 SLC18A1P54219 525 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 GALCP54803 685 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 WDR4P57081 412 aaKnown RBP17.18■□□□□ 0.34
C9orf3-206ENST00000428313 CYP1B1Q16678 543 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 ACAD11Q709F0 780 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 ZC3H3Q8IXZ2 948 aaKnown RBP17.18■□□□□ 0.34
C9orf3-206ENST00000428313 LARP4BQ92615 738 aaKnown RBP17.18■□□□□ 0.34
C9orf3-206ENST00000428313 HAUS1Q96CS2 278 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 MPP4Q96JB8 637 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 ECSITQ9BQ95 431 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 DNAJB4Q9UDY4 337 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 EXOC3O60645 756 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 ACSL3O95573 720 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 MAP3K10Q02779 954 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 CALCOCO2Q13137 446 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms