RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 CASD1Q96PB1 797 aa27.66■■■□□ 2.02
HERPUD2-205ENST00000427455 CDX2Q99626 313 aaPredicted RBP27.66■■■□□ 2.02
HERPUD2-205ENST00000427455 MRPL4Q9BYD3 311 aaKnown RBP27.66■■■□□ 2.02
HERPUD2-205ENST00000427455 PRDM12Q9H4Q4 367 aa27.66■■■□□ 2.02
HERPUD2-205ENST00000427455 MRPL42Q9Y6G3 142 aaKnown RBP27.66■■■□□ 2.02
HERPUD2-205ENST00000427455 COL4A4P53420 1690 aaPredicted RBP27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 KIAA1671Q9BY89 1806 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 A0A1B0GVL5 298 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 K7ENM7 598 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 NPTXRO95502 500 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 LINC00271P0C7V0 271 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 STRN3Q13033 797 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 NT5DC1Q5TFE4 455 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 ATF7IP2Q5U623 682 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 GLB1LQ6UWU2 654 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 HAUS6Q7Z4H7 955 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 FAM178BQ8IXR5 827 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 HACE1Q8IYU2 909 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 LRRC43Q8N309 656 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 SLC17A8Q8NDX2 589 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 HELQQ8TDG4 1101 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 ADPGKQ9BRR6 497 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 SEL1LQ9UBV2 794 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 HPSEQ9Y251 543 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 USP20Q9Y2K6 914 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 TRANK1O15050 2925 aa27.65■■■□□ 2.02
HERPUD2-205ENST00000427455 FAM237AA0A1B0GTK4 181 aa27.64■■■□□ 2.02
HERPUD2-205ENST00000427455 MEIS3P2A8K0S8 358 aa27.64■■■□□ 2.02
HERPUD2-205ENST00000427455 GAP43P17677 238 aa27.64■■■□□ 2.02
HERPUD2-205ENST00000427455 ABCD1P33897 745 aa27.64■■■□□ 2.02
HERPUD2-205ENST00000427455 LONRF3Q496Y0 759 aa27.64■■■□□ 2.02
HERPUD2-205ENST00000427455 AGMOQ6ZNB7 445 aa27.64■■■□□ 2.02
HERPUD2-205ENST00000427455 TMEM192Q8IY95 271 aa27.64■■■□□ 2.02
HERPUD2-205ENST00000427455 STAMQ92783 540 aa27.64■■■□□ 2.02
HERPUD2-205ENST00000427455 FIZ1Q96SL8 496 aa27.64■■■□□ 2.02
HERPUD2-205ENST00000427455 MRPL9Q9BYD2 267 aaKnown RBP27.64■■■□□ 2.02
HERPUD2-205ENST00000427455 FRMD3A2A2Y4 597 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 EPOPA6NHQ4 379 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 ITGA4P13612 1032 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 CTNNB1P35222 781 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 DCAF4L1Q3SXM0 396 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 EPC2Q52LR7 807 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 APBB1IPQ7Z5R6 666 aaPredicted RBP27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 SFR1Q86XK3 245 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 CEP57L1Q8IYX8 460 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 FBXO22Q8NEZ5 403 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 MYLIPQ8WY64 445 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 MRPS27Q92552 414 aaKnown RBP27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 ACO2Q99798 780 aaKnown RBP27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 TRIM9Q9C026 710 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 NXF3Q9H4D5 531 aaKnown RBP27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 RSAD1Q9HA92 442 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 UBN1Q9NPG3 1134 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 USP25Q9UHP3 1055 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 TNFSF13BQ9Y275 285 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 MYO9BQ13459 2157 aa27.63■■■□□ 2.01
HERPUD2-205ENST00000427455 IDEP14735 1019 aa27.62■■■□□ 2.01
HERPUD2-205ENST00000427455 EEF1DP3Q658K8 133 aa27.62■■■□□ 2.01
HERPUD2-205ENST00000427455 CNNM4Q6P4Q7 775 aa27.62■■■□□ 2.01
HERPUD2-205ENST00000427455 FSIP1Q8NA03 581 aa27.62■■■□□ 2.01
HERPUD2-205ENST00000427455 GAS2L1Q99501 681 aaPredicted RBP27.62■■■□□ 2.01
HERPUD2-205ENST00000427455 TARS2Q9BW92 718 aaKnown RBP27.62■■■□□ 2.01
HERPUD2-205ENST00000427455 HES2Q9Y543 173 aa27.62■■■□□ 2.01
HERPUD2-205ENST00000427455 ACTN4O43707 911 aaKnown RBP27.61■■■□□ 2.01
HERPUD2-205ENST00000427455 SLFN14P0C7P3 912 aa27.61■■■□□ 2.01
HERPUD2-205ENST00000427455 BMPR1AP36894 532 aa27.61■■■□□ 2.01
HERPUD2-205ENST00000427455 SYKP43405 635 aa27.61■■■□□ 2.01
HERPUD2-205ENST00000427455 CCDC65Q8IXS2 484 aa27.61■■■□□ 2.01
HERPUD2-205ENST00000427455 ST6GALNAC4Q9H4F1 302 aa27.61■■■□□ 2.01
HERPUD2-205ENST00000427455 TSHZ2Q9NRE2 1034 aa27.61■■■□□ 2.01
HERPUD2-205ENST00000427455 OLFML3Q9NRN5 406 aa27.61■■■□□ 2.01
HERPUD2-205ENST00000427455 TYW1Q9NV66 732 aaKnown RBP27.61■■■□□ 2.01
HERPUD2-205ENST00000427455 ZMYM2Q9UBW7 1377 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 C5orf67F2Z3F1 127 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 OFD1O75665 1012 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 NMT1P30419 496 aaKnown RBP27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 NDUFA8P51970 172 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 NOMO2Q5JPE7 1267 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 SPOUT1Q5T280 376 aaKnown RBP27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 ZPBP2Q6X784 338 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 URGCPQ8TCY9 931 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 GDPD5Q8WTR4 605 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 C7orf25Q9BPX7 421 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 APOL6Q9BWW8 343 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 PLVAPQ9BX97 442 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 RNF39Q9H2S5 420 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 PANK4Q9NVE7 773 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 HCSTQ9UBK5 93 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 SERTAD1Q9UHV2 236 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 TBX20Q9UMR3 447 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 INPP5FQ9Y2H2 1132 aa27.6■■■□□ 2.01
HERPUD2-205ENST00000427455 GOLGA6L4A6NEF3 574 aa27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 RB1P06400 928 aa27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 FOSL2P15408 326 aa27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 ASIC1P78348 528 aa27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 GTF2BQ00403 316 aa27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 CSPP1Q1MSJ5 1256 aa27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 ZNF568Q3ZCX4 644 aa27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 TPRNQ4KMQ1 711 aa27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 HERC4Q5GLZ8 1057 aaPredicted RBP27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms