RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PGM1P36871 562 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 CHRNDQ07001 517 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 CMTR1Q8N1G2 835 aaKnown RBP15.27■□□□□ 0.04
PTPN13-203ENST00000427191 MTA3Q9BTC8 594 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 FBXO40Q9UH90 709 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 BRAFP15056 766 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 PDCLQ13371 301 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 NUP85Q9BW27 656 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 TBC1D22BQ9NU19 505 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 IL1RAPL1Q9NZN1 696 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 E7ENQ6 273 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 BYSLQ13895 437 aaKnown RBP15.27■□□□□ 0.04
PTPN13-203ENST00000427191 ZNF772Q68DY9 489 aaPredicted RBP15.27■□□□□ 0.04
PTPN13-203ENST00000427191 EPN3Q9H201 632 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 NDUFA13Q9P0J0 144 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 RANBP1P43487 201 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 HNRNPH2P55795 449 aaKnown RBP15.27■□□□□ 0.04
PTPN13-203ENST00000427191 MIGA2Q7L4E1 593 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 PPHLN1Q8NEY8 458 aaKnown RBP15.27■□□□□ 0.04
PTPN13-203ENST00000427191 MRPL48Q96GC5 212 aaKnown RBP15.27■□□□□ 0.04
PTPN13-203ENST00000427191 MOV10L1Q9BXT6 1211 aaKnown RBP15.27■□□□□ 0.04
PTPN13-203ENST00000427191 PARVAQ9NVD7 372 aa15.27■□□□□ 0.04
PTPN13-203ENST00000427191 CLDN3O15551 220 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 DTNBO60941 627 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 CD58P19256 250 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 COPB2P35606 906 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 SOX6P35712 828 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 TRAF7Q6Q0C0 670 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 HDDC2Q7Z4H3 204 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 GINS4Q9BRT9 223 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.27■□□□□ 0.03
PTPN13-203ENST00000427191 SLC4A7Q9Y6M7 1214 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 GPS1Q13098 491 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 ZNF564Q8TBZ8 553 aaPredicted RBP15.27■□□□□ 0.03
PTPN13-203ENST00000427191 EPC1Q9H2F5 836 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 CLIC2O15247 247 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 CCNYL1Q8N7R7 359 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 SGSM3Q96HU1 749 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 PLEKHA8Q96JA3 519 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 MAD2L2Q9UI95 211 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 ZNF711Q9Y462 761 aa15.27■□□□□ 0.03
PTPN13-203ENST00000427191 TK2O00142 265 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 BLVRAP53004 296 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 C4orf22Q6V702 233 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 DDIASQ8IXT1 998 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 H7C0S8 307 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 H2AFYO75367 372 aaKnown RBP15.26■□□□□ 0.03
PTPN13-203ENST00000427191 TIPINQ9BVW5 301 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 G3BP2Q9UN86 482 aaKnown RBP15.26■□□□□ 0.03
PTPN13-203ENST00000427191 TYK2P29597 1187 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 FAM47EQ6ZV65 393 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.26■□□□□ 0.03
PTPN13-203ENST00000427191 UBXN8O00124 270 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 DNAJC6O75061 913 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 STXBP2Q15833 593 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 FTOQ9C0B1 505 aaKnown RBP eCLIP15.26■□□□□ 0.03
PTPN13-203ENST00000427191 ZFATQ9P243 1243 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 PITPNM2Q9BZ72 1349 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 H2AFY2Q9P0M6 372 aaPredicted RBP15.26■□□□□ 0.03
PTPN13-203ENST00000427191 APOL1O14791 398 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 RXRBP28702 533 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 TSC22D4Q9Y3Q8 395 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 REREQ9P2R6 1566 aa15.26■□□□□ 0.03
PTPN13-203ENST00000427191 BBOX1O75936 387 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 NR3C1P04150 777 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 KCNA2P16389 499 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 BCAMP50895 628 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 MAPK6Q16659 721 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 WLSQ5T9L3 541 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 EAF2Q96CJ1 260 aaPredicted RBP15.25■□□□□ 0.03
PTPN13-203ENST00000427191 CASS4Q9NQ75 786 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 SLC9A2Q9UBY0 812 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 ADAMTS1Q9UHI8 967 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 APPL1Q9UKG1 709 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 ATP7BP35670 1465 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 TTC37Q6PGP7 1564 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 PBRM1Q86U86 1689 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 M0R3G1 203 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 NEMP1O14524 444 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 KPNB1Q14974 876 aaKnown RBP15.25■□□□□ 0.03
PTPN13-203ENST00000427191 PRPF18Q99633 342 aaKnown RBP15.25■□□□□ 0.03
PTPN13-203ENST00000427191 AIPL1Q9NZN9 384 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 PVALEFA0A1B0GWK0 134 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 NUP62P37198 522 aaPredicted RBP15.25■□□□□ 0.03
PTPN13-203ENST00000427191 IREB2P48200 963 aaKnown RBP15.25■□□□□ 0.03
PTPN13-203ENST00000427191 HSD17B4P51659 736 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 NCKAP1LP55160 1127 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 CDO1Q16878 200 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 NLGN1Q8N2Q7 840 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 SH3KBP1Q96B97 665 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 GUCA1CO95843 209 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 ADD2P35612 726 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 KCNJ6P48051 423 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 FASTKD1Q53R41 847 aaKnown RBP15.25■□□□□ 0.03
PTPN13-203ENST00000427191 CARD14Q9BXL6 1004 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 TUBGCP4Q9UGJ1 667 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 A0A1W2PQC6 194 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 OR6B3Q8NGW1 331 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 EME1Q96AY2 570 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 VPS9D1Q9Y2B5 631 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms