RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 SKIP12755 728 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 ATF7P17544 494 aaPredicted RBP26.88■■□□□ 1.89
VEGFA-209ENST00000425836 ABCD1P33897 745 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 RAB27AP51159 221 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 HABP4Q5JVS0 413 aaKnown RBP26.88■■□□□ 1.89
VEGFA-209ENST00000425836 EEF1DP3Q658K8 133 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 MICAL3Q7RTP6 2002 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 GCNT3O95395 438 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 RPN1P04843 607 aaKnown RBP26.88■■□□□ 1.89
VEGFA-209ENST00000425836 MYBP10242 640 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 PBX2P40425 430 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 SMAD3P84022 425 aaKnown RBP26.88■■□□□ 1.89
VEGFA-209ENST00000425836 KMT5BQ4FZB7 885 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 FAM26FQ5R3K3 315 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 GLIS3Q8NEA6 775 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 PBX4Q9BYU1 374 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 PTPRHQ9HD43 1115 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 RNF216Q9NWF9 866 aaPredicted RBP26.88■■□□□ 1.89
VEGFA-209ENST00000425836 PCDHB13Q9Y5F0 798 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 GOLGA6L22H0YM25 854 aa26.87■■□□□ 1.89
VEGFA-209ENST00000425836 TLL1O43897 1013 aa26.87■■□□□ 1.89
VEGFA-209ENST00000425836 NPTXRO95502 500 aa26.87■■□□□ 1.89
VEGFA-209ENST00000425836 EOMESO95936 686 aa26.87■■□□□ 1.89
VEGFA-209ENST00000425836 HTRA4P83105 476 aaPredicted RBP26.87■■□□□ 1.89
VEGFA-209ENST00000425836 PNOCQ13519 176 aa26.87■■□□□ 1.89
VEGFA-209ENST00000425836 MRPL10Q7Z7H8 261 aaKnown RBP26.87■■□□□ 1.89
VEGFA-209ENST00000425836 MAP4K3Q8IVH8 894 aa26.87■■□□□ 1.89
VEGFA-209ENST00000425836 ELOA2Q8IYF1 753 aaPredicted RBP26.87■■□□□ 1.89
VEGFA-209ENST00000425836 SMG8Q8ND04 991 aaKnown RBP26.87■■□□□ 1.89
VEGFA-209ENST00000425836 HVCN1Q96D96 273 aa26.87■■□□□ 1.89
VEGFA-209ENST00000425836 RAD9AQ99638 391 aa26.87■■□□□ 1.89
VEGFA-209ENST00000425836 DGKIO75912 1065 aa26.86■■□□□ 1.89
VEGFA-209ENST00000425836 MYOGP15173 224 aa26.86■■□□□ 1.89
VEGFA-209ENST00000425836 ZPBP2Q6X784 338 aa26.86■■□□□ 1.89
VEGFA-209ENST00000425836 RNF169Q8NCN4 708 aa26.86■■□□□ 1.89
VEGFA-209ENST00000425836 EXOC1Q9NV70 894 aa26.86■■□□□ 1.89
VEGFA-209ENST00000425836 PCDHA11Q9Y5I1 949 aa26.86■■□□□ 1.89
VEGFA-209ENST00000425836 LAMA3Q16787 3333 aa26.85■■□□□ 1.89
VEGFA-209ENST00000425836 SOX1O00570 391 aaPredicted RBP26.85■■□□□ 1.89
VEGFA-209ENST00000425836 PIGRP01833 764 aa26.85■■□□□ 1.89
VEGFA-209ENST00000425836 PROZP22891 400 aa26.85■■□□□ 1.89
VEGFA-209ENST00000425836 KCNA1Q09470 495 aa26.85■■□□□ 1.89
VEGFA-209ENST00000425836 ALCAMQ13740 583 aa26.85■■□□□ 1.89
VEGFA-209ENST00000425836 L1TD1Q5T7N2 865 aaKnown RBP26.85■■□□□ 1.89
VEGFA-209ENST00000425836 BICD1Q96G01 975 aa26.85■■□□□ 1.89
VEGFA-209ENST00000425836 ADPGKQ9BRR6 497 aa26.85■■□□□ 1.89
VEGFA-209ENST00000425836 TRIM6Q9C030 488 aaPredicted RBP26.85■■□□□ 1.89
VEGFA-209ENST00000425836 RNF19AQ9NV58 838 aa26.85■■□□□ 1.89
VEGFA-209ENST00000425836 YBX2Q9Y2T7 364 aaKnown RBP26.85■■□□□ 1.89
VEGFA-209ENST00000425836 IPPQ9Y573 584 aa26.85■■□□□ 1.89
VEGFA-209ENST00000425836 INSL6Q9Y581 213 aa26.85■■□□□ 1.89
VEGFA-209ENST00000425836 ABLIM1O14639 778 aa26.84■■□□□ 1.89
VEGFA-209ENST00000425836 FGFR1P11362 822 aa26.84■■□□□ 1.89
VEGFA-209ENST00000425836 LPPQ93052 612 aa26.84■■□□□ 1.89
VEGFA-209ENST00000425836 ZBTB45Q96K62 511 aaPredicted RBP26.84■■□□□ 1.89
VEGFA-209ENST00000425836 ACCSQ96QU6 501 aa26.84■■□□□ 1.89
VEGFA-209ENST00000425836 YME1L1Q96TA2 773 aa26.84■■□□□ 1.89
VEGFA-209ENST00000425836 SLC39A2Q9NP94 309 aa26.84■■□□□ 1.89
VEGFA-209ENST00000425836 HOOK1Q9UJC3 728 aaKnown RBP26.84■■□□□ 1.89
VEGFA-209ENST00000425836 HES2Q9Y543 173 aa26.84■■□□□ 1.89
VEGFA-209ENST00000425836 MEIS3P2A8K0S8 358 aa26.84■■□□□ 1.89
VEGFA-209ENST00000425836 TOM1L1O75674 476 aa26.84■■□□□ 1.89
VEGFA-209ENST00000425836 PRPF6O94906 941 aaKnown RBP26.84■■□□□ 1.89
VEGFA-209ENST00000425836 GATMP50440 423 aa26.84■■□□□ 1.89
VEGFA-209ENST00000425836 TTC3P53804 2025 aa26.84■■□□□ 1.89
VEGFA-209ENST00000425836 EPM2AIP1Q7L775 607 aaPredicted RBP26.84■■□□□ 1.89
VEGFA-209ENST00000425836 ERCC4Q92889 916 aaPredicted RBP26.84■■□□□ 1.89
VEGFA-209ENST00000425836 ZNF689Q96CS4 500 aaPredicted RBP26.84■■□□□ 1.89
VEGFA-209ENST00000425836 NXF3Q9H4D5 531 aaKnown RBP26.84■■□□□ 1.89
VEGFA-209ENST00000425836 RC3H2Q9HBD1 1191 aaKnown RBP26.84■■□□□ 1.89
VEGFA-209ENST00000425836 MSRAQ9UJ68 235 aa26.84■■□□□ 1.89
VEGFA-209ENST00000425836 HNRNPDLO14979 420 aaKnown RBP26.83■■□□□ 1.89
VEGFA-209ENST00000425836 LIG4P49917 911 aa26.83■■□□□ 1.89
VEGFA-209ENST00000425836 STK4Q13043 487 aa26.83■■□□□ 1.89
VEGFA-209ENST00000425836 PSMD2Q13200 908 aa26.83■■□□□ 1.89
VEGFA-209ENST00000425836 RAB30Q15771 203 aa26.83■■□□□ 1.89
VEGFA-209ENST00000425836 DCAF4L1Q3SXM0 396 aa26.83■■□□□ 1.89
VEGFA-209ENST00000425836 MPZL3Q6UWV2 235 aa26.83■■□□□ 1.89
VEGFA-209ENST00000425836 STXBP4Q6ZWJ1 553 aa26.83■■□□□ 1.89
VEGFA-209ENST00000425836 PGBD4Q96DM1 585 aa26.83■■□□□ 1.89
VEGFA-209ENST00000425836 TCHPQ9BT92 498 aa26.83■■□□□ 1.89
VEGFA-209ENST00000425836 CDT1Q9H211 546 aa26.83■■□□□ 1.89
VEGFA-209ENST00000425836 RNF39Q9H2S5 420 aa26.83■■□□□ 1.89
VEGFA-209ENST00000425836 IKZF4Q9H2S9 585 aa26.83■■□□□ 1.89
VEGFA-209ENST00000425836 MYH11P35749 1972 aa26.82■■□□□ 1.88
VEGFA-209ENST00000425836 LCHNA4D1U4 455 aa26.82■■□□□ 1.88
VEGFA-209ENST00000425836 RHOBTB3O94955 611 aa26.82■■□□□ 1.88
VEGFA-209ENST00000425836 KCNB1Q14721 858 aa26.82■■□□□ 1.88
VEGFA-209ENST00000425836 ZNF568Q3ZCX4 644 aa26.82■■□□□ 1.88
VEGFA-209ENST00000425836 CLLU1OSQ5K130 101 aa26.82■■□□□ 1.88
VEGFA-209ENST00000425836 SLC39A4Q6P5W5 647 aa26.82■■□□□ 1.88
VEGFA-209ENST00000425836 AGMOQ6ZNB7 445 aa26.82■■□□□ 1.88
VEGFA-209ENST00000425836 ZBTB33Q86T24 672 aa26.82■■□□□ 1.88
VEGFA-209ENST00000425836 CCDC47Q96A33 483 aaKnown RBP26.82■■□□□ 1.88
VEGFA-209ENST00000425836 PCDHA5Q9Y5H7 936 aa26.82■■□□□ 1.88
VEGFA-209ENST00000425836 ANKRD63C9JTQ0 380 aa26.81■■□□□ 1.88
VEGFA-209ENST00000425836 EIF3DO15371 548 aaKnown RBP eCLIP26.81■■□□□ 1.88
VEGFA-209ENST00000425836 HOXA2O43364 376 aa26.81■■□□□ 1.88
VEGFA-209ENST00000425836 DNAJB2P25686 324 aa26.81■■□□□ 1.88
VEGFA-209ENST00000425836 APBB1IPQ7Z5R6 666 aaPredicted RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms