RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 GDF15Q99988 308 aa26.41■■□□□ 1.82
APOE-202ENST00000425718 UBE2OQ9C0C9 1292 aaKnown RBP26.41■■□□□ 1.82
APOE-202ENST00000425718 TMX1Q9H3N1 280 aa26.41■■□□□ 1.82
APOE-202ENST00000425718 MAN1B1Q9UKM7 699 aa26.41■■□□□ 1.82
APOE-202ENST00000425718 CITO14578 2027 aa26.41■■□□□ 1.82
APOE-202ENST00000425718 KIAA0391O15091 583 aaKnown RBP26.4■■□□□ 1.82
APOE-202ENST00000425718 AMHP03971 560 aa26.4■■□□□ 1.82
APOE-202ENST00000425718 STAG3L1P0CL83 205 aa26.4■■□□□ 1.82
APOE-202ENST00000425718 HOXA11P31270 313 aaPredicted RBP26.4■■□□□ 1.82
APOE-202ENST00000425718 STK4Q13043 487 aa26.4■■□□□ 1.82
APOE-202ENST00000425718 ZC2HC1CQ53FD0 456 aaPredicted RBP26.4■■□□□ 1.82
APOE-202ENST00000425718 RBM43Q6ZSC3 357 aaKnown RBP26.4■■□□□ 1.82
APOE-202ENST00000425718 GUF1Q8N442 669 aaKnown RBP26.4■■□□□ 1.82
APOE-202ENST00000425718 GBP3Q9H0R5 595 aa26.4■■□□□ 1.82
APOE-202ENST00000425718 PRPF6O94906 941 aaKnown RBP26.39■■□□□ 1.82
APOE-202ENST00000425718 MPZL3Q6UWV2 235 aa26.39■■□□□ 1.82
APOE-202ENST00000425718 KIAA0895Q8NCT3 520 aa26.39■■□□□ 1.82
APOE-202ENST00000425718 SCFD1Q8WVM8 642 aa26.39■■□□□ 1.82
APOE-202ENST00000425718 PGBD4Q96DM1 585 aa26.39■■□□□ 1.82
APOE-202ENST00000425718 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.39■■□□□ 1.82
APOE-202ENST00000425718 TCHPQ9BT92 498 aa26.39■■□□□ 1.82
APOE-202ENST00000425718 OSBPL7Q9BZF2 842 aa26.39■■□□□ 1.82
APOE-202ENST00000425718 ELAC1Q9H777 363 aaKnown RBP26.39■■□□□ 1.82
APOE-202ENST00000425718 A0A0U1RQF3 1178 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 ENPP3O14638 875 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 CLDN3O15551 220 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 B4GALT5O43286 388 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 ZNF623O75123 536 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 EOMESO95936 686 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 MATR3P43243 847 aaKnown RBP eCLIP26.38■■□□□ 1.811e-8■■□□□ 12.6
APOE-202ENST00000425718 CASP5P51878 434 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 MORC3Q14149 939 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 KNOP1Q1ED39 458 aaKnown RBP26.38■■□□□ 1.81
APOE-202ENST00000425718 PHOSPHO2Q8TCD6 241 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 HPS3Q969F9 1004 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 VWCEQ96DN2 955 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 CPB2Q96IY4 423 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 SLC9A7Q96T83 725 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 TARS2Q9BW92 718 aaKnown RBP26.38■■□□□ 1.81
APOE-202ENST00000425718 PDZD7Q9H5P4 517 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 FAM105AQ9NUU6 356 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 DACH1Q9UI36 760 aa26.38■■□□□ 1.81
APOE-202ENST00000425718 TNRC18O15417 2968 aaPredicted RBP26.38■■□□□ 1.81
APOE-202ENST00000425718 ZBBXA8MT70 800 aa26.37■■□□□ 1.81
APOE-202ENST00000425718 HOXA2O43364 376 aa26.37■■□□□ 1.81
APOE-202ENST00000425718 MCF2P10911 925 aa26.37■■□□□ 1.81
APOE-202ENST00000425718 NOLC1Q14978 699 aaKnown RBP eCLIP26.37■■□□□ 1.81
APOE-202ENST00000425718 ZNF568Q3ZCX4 644 aa26.37■■□□□ 1.81
APOE-202ENST00000425718 CAVIN1Q6NZI2 390 aaKnown RBP26.37■■□□□ 1.81
APOE-202ENST00000425718 C16orf59Q7L2K0 433 aa26.37■■□□□ 1.81
APOE-202ENST00000425718 OTOP2Q7RTS6 562 aa26.37■■□□□ 1.81
APOE-202ENST00000425718 ERCC4Q92889 916 aaPredicted RBP26.37■■□□□ 1.81
APOE-202ENST00000425718 UBN1Q9NPG3 1134 aa26.37■■□□□ 1.81
APOE-202ENST00000425718 LRFN2Q9ULH4 789 aa26.37■■□□□ 1.81
APOE-202ENST00000425718 ZMYM2Q9UBW7 1377 aa26.36■■□□□ 1.81
APOE-202ENST00000425718 C9IYK1 514 aa26.36■■□□□ 1.81
APOE-202ENST00000425718 PSMA7O14818 248 aa26.36■■□□□ 1.81
APOE-202ENST00000425718 GARTP22102 1010 aa26.36■■□□□ 1.81
APOE-202ENST00000425718 PROZP22891 400 aa26.36■■□□□ 1.81
APOE-202ENST00000425718 WDR5P61964 334 aaKnown RBP26.36■■□□□ 1.81
APOE-202ENST00000425718 SASS6Q6UVJ0 657 aa26.36■■□□□ 1.81
APOE-202ENST00000425718 NPAS4Q8IUM7 802 aa26.36■■□□□ 1.81
APOE-202ENST00000425718 TYW1Q9NV66 732 aaKnown RBP26.36■■□□□ 1.81
APOE-202ENST00000425718 PCDHB7Q9Y5E2 793 aa26.36■■□□□ 1.81
APOE-202ENST00000425718 STYXL1Q9Y6J8 313 aa26.36■■□□□ 1.81
APOE-202ENST00000425718 SLC4A7Q9Y6M7 1214 aa26.36■■□□□ 1.81
APOE-202ENST00000425718 PDXKO00764 312 aa26.35■■□□□ 1.81
APOE-202ENST00000425718 CALUO43852 315 aaPredicted RBP26.35■■□□□ 1.81
APOE-202ENST00000425718 MGEA5O60502 916 aa26.35■■□□□ 1.81
APOE-202ENST00000425718 LDHAP00338 332 aaKnown RBP26.35■■□□□ 1.81
APOE-202ENST00000425718 FAM189BP81408 668 aa26.35■■□□□ 1.81
APOE-202ENST00000425718 MCL1Q07820 350 aa26.35■■□□□ 1.81
APOE-202ENST00000425718 CT47A1Q5JQC4 288 aaPredicted RBP26.35■■□□□ 1.81
APOE-202ENST00000425718 MLKLQ8NB16 471 aa26.35■■□□□ 1.81
APOE-202ENST00000425718 RNPC3Q96LT9 517 aaKnown RBP26.35■■□□□ 1.81
APOE-202ENST00000425718 FGFBP2Q9BYJ0 223 aa26.35■■□□□ 1.81
APOE-202ENST00000425718 PTPRHQ9HD43 1115 aa26.35■■□□□ 1.81
APOE-202ENST00000425718 TMEM161AQ9NX61 479 aa26.35■■□□□ 1.81
APOE-202ENST00000425718 GDAQ9Y2T3 454 aa26.35■■□□□ 1.81
APOE-202ENST00000425718 PCDHB2Q9Y5E7 798 aa26.35■■□□□ 1.81
APOE-202ENST00000425718 EPHB4P54760 987 aa26.34■■□□□ 1.81
APOE-202ENST00000425718 POU5F1Q01860 360 aaKnown RBP26.34■■□□□ 1.81
APOE-202ENST00000425718 ECHDC2Q86YB7 292 aa26.34■■□□□ 1.81
APOE-202ENST00000425718 POMGNT1Q8WZA1 660 aa26.34■■□□□ 1.81
APOE-202ENST00000425718 DHTKD1Q96HY7 919 aaPredicted RBP26.34■■□□□ 1.81
APOE-202ENST00000425718 TSG101Q99816 390 aa26.34■■□□□ 1.81
APOE-202ENST00000425718 TMEM63CQ9P1W3 806 aa26.34■■□□□ 1.81
APOE-202ENST00000425718 ANKFY1Q9P2R3 1169 aa26.34■■□□□ 1.81
APOE-202ENST00000425718 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.33■■□□□ 1.81
APOE-202ENST00000425718 A0A1W2PPC1 479 aa26.33■■□□□ 1.81
APOE-202ENST00000425718 NPTXRO95502 500 aa26.33■■□□□ 1.81
APOE-202ENST00000425718 MYBPC2Q14324 1141 aa26.33■■□□□ 1.81
APOE-202ENST00000425718 RASIP1Q5U651 963 aa26.33■■□□□ 1.81
APOE-202ENST00000425718 ARMCX5Q6P1M9 558 aa26.33■■□□□ 1.81
APOE-202ENST00000425718 MRPL10Q7Z7H8 261 aaKnown RBP26.33■■□□□ 1.81
APOE-202ENST00000425718 RTN4RL1Q86UN2 441 aaPredicted RBP26.33■■□□□ 1.81
APOE-202ENST00000425718 NELFCDQ8IXH7 590 aa26.33■■□□□ 1.81
APOE-202ENST00000425718 C12orf56Q8IXR9 622 aa26.33■■□□□ 1.81
APOE-202ENST00000425718 LINC01599Q8WXQ3 324 aa26.33■■□□□ 1.81
APOE-202ENST00000425718 CCDC94Q9BW85 323 aaPredicted RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms