RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 PGBD1Q96JS3 809 aa11.85□□□□□ -0.51
RAPGEF1-205ENST00000419442 SCLT1Q96NL6 688 aa11.85□□□□□ -0.51
RAPGEF1-205ENST00000419442 MTA3Q9BTC8 594 aa11.85□□□□□ -0.51
RAPGEF1-205ENST00000419442 RSAD1Q9HA92 442 aa11.85□□□□□ -0.51
RAPGEF1-205ENST00000419442 RIC8AQ9NPQ8 531 aa11.85□□□□□ -0.51
RAPGEF1-205ENST00000419442 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.85□□□□□ -0.51
RAPGEF1-205ENST00000419442 TBC1D22BQ9NU19 505 aa11.85□□□□□ -0.51
RAPGEF1-205ENST00000419442 FNIP2Q9P278 1114 aa11.85□□□□□ -0.51
RAPGEF1-205ENST00000419442 GABBR1Q9UBS5 961 aa11.85□□□□□ -0.51
RAPGEF1-205ENST00000419442 ZMIZ1Q9ULJ6 1067 aa11.85□□□□□ -0.51
RAPGEF1-205ENST00000419442 PIN4Q9Y237 131 aaKnown RBP11.85□□□□□ -0.51
RAPGEF1-205ENST00000419442 PCDHA10Q9Y5I2 948 aa11.85□□□□□ -0.51
RAPGEF1-205ENST00000419442 TAF6LQ9Y6J9 622 aa11.85□□□□□ -0.51
RAPGEF1-205ENST00000419442 F5P12259 2224 aa11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 SOBPA7XYQ1 873 aa11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 E7EWF7 191 aa11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 OATP04181 439 aa11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 CLK2P49760 499 aaKnown RBP11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 AP3B2Q13367 1082 aa11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 ZNF852Q6ZMS4 543 aa11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 RALYLQ86SE5 291 aaKnown RBP11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 ZNF410Q86VK4 478 aa11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 PALB2Q86YC2 1186 aa11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 FGF13Q92913 245 aa11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 PHF20Q9BVI0 1012 aa11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 INO80BQ9C086 356 aaPredicted RBP11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 MRPS17Q9Y2R5 130 aaKnown RBP11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 PCDHB2Q9Y5E7 798 aa11.84□□□□□ -0.51
RAPGEF1-205ENST00000419442 FRYQ5TBA9 3013 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 A0A087WZ62 844 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 IGKV6-21A0A0C4DH24 114 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 hCG_1642624A0A1W2PR95 340 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 CYP3A4P08684 503 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 POU2F2P09086 479 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 HNRNPA1P09651 372 aaKnown RBP eCLIP11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 HOXA9P31269 272 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 NTHL1P78549 312 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 DSC1Q08554 894 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 HDAC1Q13547 482 aaPredicted RBP11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 WWC2Q6AWC2 1192 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 IL31Q6EBC2 164 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 PPP1R18Q6NYC8 613 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 UNQ6494/PRO21346Q6UXR6 183 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 TRMT1LQ7Z2T5 733 aaKnown RBP11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 HEATR3Q7Z4Q2 680 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 GRASPQ7Z6J2 395 aaPredicted RBP11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 PLEKHM2Q8IWE5 1019 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 FAM193BQ96PV7 902 aaPredicted RBP11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 CEP89Q96ST8 783 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 FDXACB1Q9BRP7 624 aaPredicted RBP11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 TMEM121BQ9BXQ6 578 aaPredicted RBP11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 LNPKQ9C0E8 428 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 NRBP2Q9NSY0 501 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 AGPAT5Q9NUQ2 364 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 FBXW11Q9UKB1 542 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 PRG3Q9Y2Y8 225 aaPredicted RBP11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 SPAG17Q6Q759 2223 aa11.83□□□□□ -0.52
RAPGEF1-205ENST00000419442 C1QTNF9BB2RNN3 333 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 HRO43593 1189 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 ECI2O75521 394 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 C1QTNF9P0C862 333 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 CNR2P34972 360 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 ZNF76P36508 570 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 CCR3P51677 355 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 PRKCEQ02156 737 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 SIM2Q14190 667 aaPredicted RBP11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 PPP2R5DQ14738 602 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 UBXN11Q5T124 520 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 PRR23BQ6ZRT6 265 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 TMTC3Q6ZXV5 915 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 ITFG1Q8TB96 612 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 DNASE1L2Q92874 299 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 KXD1Q9BQD3 176 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 ZNF577Q9BSK1 485 aa11.82□□□□□ -0.52
RAPGEF1-205ENST00000419442 WDR64B1ANS9 1081 aa11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 POMCP01189 267 aa11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 CALM1P0DP23 149 aa11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 CALM2P0DP24 149 aa11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 CALM3P0DP25 149 aa11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 NCLP19338 710 aaKnown RBP11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 OR1G1P47890 313 aa11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 ADCY7P51828 1080 aa11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 SETQ01105 290 aaPredicted RBP11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 CREMQ03060 361 aa11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 CATSPER4Q7RTX7 472 aa11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 NPAS3Q8IXF0 933 aa11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 NIFKQ9BYG3 293 aaKnown RBP11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 HEBP1Q9NRV9 189 aa11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 KCNH3Q9ULD8 1083 aa11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 TICRRQ7Z2Z1 1910 aa11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 IGF2RP11717 2491 aa11.81□□□□□ -0.52
RAPGEF1-205ENST00000419442 PDCD11Q14690 1871 aaKnown RBP11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 TMEM8BA6NDV4 472 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 F8W810 466 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 MAN2B1O00754 1011 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 PAPSS2O95340 614 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 RXRAP19793 462 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 NAPAP54920 295 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 UGCGQ16739 394 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 USP41Q3LFD5 358 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms