RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 GRIK3Q13003 919 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 MTAPQ13126 283 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 MTMR1Q13613 665 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 TMEM196Q5HYL7 178 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 SPECC1Q5M775 1068 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 ALKAL1Q6UXT8 129 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 TMTC2Q8N394 836 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 SMG8Q8ND04 991 aaKnown RBP6.97□□□□□ -1.29
LMBR1-204ENST00000415428 ATRIPQ8WXE1 791 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 KAT14Q9H8E8 782 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 IFT122Q9HBG6 1241 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 CD248Q9HCU0 757 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 KLRF2D3W0D1 207 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 HOXB3P14651 431 aaPredicted RBP6.97□□□□□ -1.29
LMBR1-204ENST00000415428 MUTP22033 750 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 KLRC1P26715 233 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 JAK3P52333 1124 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 SNAP25P60880 206 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 LNX1Q8TBB1 728 aaPredicted RBP6.97□□□□□ -1.29
LMBR1-204ENST00000415428 DHX33Q9H6R0 707 aaKnown RBP6.97□□□□□ -1.29
LMBR1-204ENST00000415428 ZNF334Q9HCZ1 680 aaPredicted RBP6.97□□□□□ -1.29
LMBR1-204ENST00000415428 SH3GLB2Q9NR46 395 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 ZSWIM5Q9P217 1185 aa6.97□□□□□ -1.29
LMBR1-204ENST00000415428 WDR27A2RRH5 827 aa6.96□□□□□ -1.29
LMBR1-204ENST00000415428 TEX28O15482 410 aa6.96□□□□□ -1.29
LMBR1-204ENST00000415428 IGLV3-19P01714 112 aa6.96□□□□□ -1.29
LMBR1-204ENST00000415428 SRSF1Q07955 248 aaKnown RBP eCLIP6.96□□□□□ -1.29
LMBR1-204ENST00000415428 PDZD3Q86UT5 571 aa6.96□□□□□ -1.29
LMBR1-204ENST00000415428 TMEM173Q86WV6 379 aaPredicted RBP6.96□□□□□ -1.29
LMBR1-204ENST00000415428 ASB16Q96NS5 453 aa6.96□□□□□ -1.29
LMBR1-204ENST00000415428 MYL10Q9BUA6 226 aa6.96□□□□□ -1.29
LMBR1-204ENST00000415428 MKNK1Q9BUB5 465 aa6.96□□□□□ -1.29
LMBR1-204ENST00000415428 PCED1AQ9H1Q7 454 aa6.96□□□□□ -1.29
LMBR1-204ENST00000415428 GPCPD1Q9NPB8 672 aa6.96□□□□□ -1.29
LMBR1-204ENST00000415428 KCNH7Q9NS40 1196 aa6.96□□□□□ -1.29
LMBR1-204ENST00000415428 FAM105AQ9NUU6 356 aa6.96□□□□□ -1.29
LMBR1-204ENST00000415428 TPCN1Q9ULQ1 816 aa6.96□□□□□ -1.29
LMBR1-204ENST00000415428 DMDP11532 3685 aa6.96□□□□□ -1.29
LMBR1-204ENST00000415428 CDX4O14627 284 aaPredicted RBP6.96□□□□□ -1.3
LMBR1-204ENST00000415428 PER2O15055 1255 aa6.96□□□□□ -1.3
LMBR1-204ENST00000415428 DDX6P26196 483 aaKnown RBP eCLIP6.96□□□□□ -1.3
LMBR1-204ENST00000415428 CEP55Q53EZ4 464 aa6.96□□□□□ -1.3
LMBR1-204ENST00000415428 TSHZ3Q63HK5 1081 aa6.96□□□□□ -1.3
LMBR1-204ENST00000415428 RFFLQ8WZ73 363 aa6.96□□□□□ -1.3
LMBR1-204ENST00000415428 DISC1Q9NRI5 854 aa6.96□□□□□ -1.3
LMBR1-204ENST00000415428 TJP2Q9UDY2 1190 aa6.96□□□□□ -1.3
LMBR1-204ENST00000415428 EPB41L2O43491 1005 aaKnown RBP6.96□□□□□ -1.3
LMBR1-204ENST00000415428 TGM5O43548 720 aa6.96□□□□□ -1.3
LMBR1-204ENST00000415428 PRDM1O75626 825 aa6.96□□□□□ -1.3
LMBR1-204ENST00000415428 FGFR1P11362 822 aa6.96□□□□□ -1.3
LMBR1-204ENST00000415428 SFPQP23246 707 aaKnown RBP eCLIP6.96□□□□□ -1.3
LMBR1-204ENST00000415428 VPS53Q5VIR6 699 aa6.96□□□□□ -1.3
LMBR1-204ENST00000415428 METTL3Q86U44 580 aaKnown RBP6.96□□□□□ -1.3
LMBR1-204ENST00000415428 CHFRQ96EP1 664 aa6.96□□□□□ -1.3
LMBR1-204ENST00000415428 AGXT2Q9BYV1 514 aa6.96□□□□□ -1.3
LMBR1-204ENST00000415428 DUSP15Q9H1R2 295 aaPredicted RBP6.96□□□□□ -1.3
LMBR1-204ENST00000415428 IL1RAPL2Q9NP60 686 aa6.96□□□□□ -1.3
LMBR1-204ENST00000415428 STX8Q9UNK0 236 aa6.96□□□□□ -1.3
LMBR1-204ENST00000415428 SUPT16HQ9Y5B9 1047 aaKnown RBP6.96□□□□□ -1.3
LMBR1-204ENST00000415428 RHOBTB1O94844 696 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 OATP04181 439 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 USP11P51784 963 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 CSTF1Q05048 431 aaKnown RBP6.95□□□□□ -1.3
LMBR1-204ENST00000415428 SCRN1Q12765 414 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 PPP2R5CQ13362 524 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 CAMK2BQ13554 666 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 GAS6Q14393 721 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 PMS2CLQ68D20 193 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 FGF14Q92915 247 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 TMEM169Q96HH4 297 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 PRIMPOLQ96LW4 560 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 SDF4Q9BRK5 362 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 CCDC195A0A1B0GUA6 201 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 DDHD2O94830 711 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 XRCC6P12956 609 aaKnown RBP eCLIP6.95□□□□□ -1.3
LMBR1-204ENST00000415428 PLA2G2AP14555 144 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 MX1P20591 662 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 RING1Q06587 406 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 DCLK2Q8N568 766 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 URGCPQ8TCY9 931 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 ASB3Q9Y575 518 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 CNTNAP5Q8WYK1 1306 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 DENND3A2RUS2 1198 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 ZNF197O14709 1029 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 TNFRSF10BO14763 440 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 NRP1O14786 923 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 XYLBO75191 536 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 EIF2DP41214 584 aaKnown RBP6.95□□□□□ -1.3
LMBR1-204ENST00000415428 ALDH7A1P49419 539 aaKnown RBP6.95□□□□□ -1.3
LMBR1-204ENST00000415428 FBXO43Q4G163 708 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 PARM1Q6UWI2 310 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 SYT13Q7L8C5 426 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 SMC5Q8IY18 1101 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 STAG2Q8N3U4 1231 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 CCDC26Q8TAB7 109 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 TMEM87BQ96K49 555 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 ZMYND12Q9H0C1 365 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 ZNF302Q9NR11 478 aa6.95□□□□□ -1.3
LMBR1-204ENST00000415428 SPATA6Q9NWH7 488 aaPredicted RBP6.95□□□□□ -1.3
LMBR1-204ENST00000415428 MTF2Q9Y483 593 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms