RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 GAD1Q99259 594 aa27.17■■□□□ 1.94
AC005540.1-201ENST00000413911 MTRQ99707 1265 aa27.17■■□□□ 1.94
AC005540.1-201ENST00000413911 EMILIN2Q9BXX0 1053 aa27.17■■□□□ 1.94
AC005540.1-201ENST00000413911 PRG3Q9Y2Y8 225 aaPredicted RBP27.17■■□□□ 1.94
AC005540.1-201ENST00000413911 C2CD2LO14523 706 aa27.16■■□□□ 1.94
AC005540.1-201ENST00000413911 INPPL1O15357 1258 aa27.16■■□□□ 1.94
AC005540.1-201ENST00000413911 GAS2O43903 313 aaKnown RBP27.16■■□□□ 1.94
AC005540.1-201ENST00000413911 ITGA4P13612 1032 aa27.16■■□□□ 1.94
AC005540.1-201ENST00000413911 XBP1P17861 261 aa27.16■■□□□ 1.94
AC005540.1-201ENST00000413911 AMHR2Q16671 573 aa27.16■■□□□ 1.94
AC005540.1-201ENST00000413911 ASAP3Q8TDY4 903 aa27.16■■□□□ 1.94
AC005540.1-201ENST00000413911 NAP1L4Q99733 375 aaKnown RBP27.16■■□□□ 1.94
AC005540.1-201ENST00000413911 HSD17B14Q9BPX1 270 aa27.16■■□□□ 1.94
AC005540.1-201ENST00000413911 EIF2AK1Q9BQI3 630 aaKnown RBP27.16■■□□□ 1.94
AC005540.1-201ENST00000413911 C2orf16Q68DN1 1984 aa27.16■■□□□ 1.94
AC005540.1-201ENST00000413911 ARL5CA6NH57 179 aa27.15■■□□□ 1.94
AC005540.1-201ENST00000413911 SOD2P04179 222 aa27.15■■□□□ 1.94
AC005540.1-201ENST00000413911 MLH1P40692 756 aa27.15■■□□□ 1.94
AC005540.1-201ENST00000413911 AK2P54819 239 aa27.15■■□□□ 1.94
AC005540.1-201ENST00000413911 DSC1Q08554 894 aa27.15■■□□□ 1.94
AC005540.1-201ENST00000413911 SLFN12Q8IYM2 578 aa27.15■■□□□ 1.94
AC005540.1-201ENST00000413911 RNF168Q8IYW5 571 aaPredicted RBP27.15■■□□□ 1.94
AC005540.1-201ENST00000413911 PLCD3Q8N3E9 789 aa27.15■■□□□ 1.94
AC005540.1-201ENST00000413911 NECAB1Q8N987 351 aa27.15■■□□□ 1.94
AC005540.1-201ENST00000413911 ATOH1Q92858 354 aaPredicted RBP27.15■■□□□ 1.94
AC005540.1-201ENST00000413911 ZFP42Q96MM3 310 aa27.15■■□□□ 1.94
AC005540.1-201ENST00000413911 MRPL17Q9NRX2 175 aaKnown RBP27.15■■□□□ 1.94
AC005540.1-201ENST00000413911 A0A087WWV3 80 aa27.14■■□□□ 1.94
AC005540.1-201ENST00000413911 GALR2O43603 387 aaPredicted RBP27.14■■□□□ 1.94
AC005540.1-201ENST00000413911 ERLIN2O94905 339 aa27.14■■□□□ 1.94
AC005540.1-201ENST00000413911 LARGE1O95461 756 aa27.14■■□□□ 1.94
AC005540.1-201ENST00000413911 MBTD1Q05BQ5 628 aa27.14■■□□□ 1.94
AC005540.1-201ENST00000413911 CAPSQ13938 189 aa27.14■■□□□ 1.94
AC005540.1-201ENST00000413911 IFNLR1Q8IU57 520 aaPredicted RBP27.14■■□□□ 1.94
AC005540.1-201ENST00000413911 RPS6KC1Q96S38 1066 aa27.14■■□□□ 1.94
AC005540.1-201ENST00000413911 HERC2P3Q9BVR0 1158 aa27.14■■□□□ 1.94
AC005540.1-201ENST00000413911 PLXNA3P51805 1871 aa27.13■■□□□ 1.93
AC005540.1-201ENST00000413911 TEX28O15482 410 aa27.13■■□□□ 1.93
AC005540.1-201ENST00000413911 LYPLA2O95372 231 aa27.13■■□□□ 1.93
AC005540.1-201ENST00000413911 BAG4O95429 457 aaKnown RBP27.13■■□□□ 1.93
AC005540.1-201ENST00000413911 MYBP10242 640 aa27.13■■□□□ 1.93
AC005540.1-201ENST00000413911 KRT2P35908 639 aa27.13■■□□□ 1.93
AC005540.1-201ENST00000413911 ARL2P36404 184 aa27.13■■□□□ 1.93
AC005540.1-201ENST00000413911 OR1G1P47890 313 aa27.13■■□□□ 1.93
AC005540.1-201ENST00000413911 SCNN1GP51170 649 aa27.13■■□□□ 1.93
AC005540.1-201ENST00000413911 KIAA0319Q5VV43 1072 aa27.13■■□□□ 1.93
AC005540.1-201ENST00000413911 CNNM3Q8NE01 707 aa27.13■■□□□ 1.93
AC005540.1-201ENST00000413911 CSRNP2Q9H175 543 aa27.13■■□□□ 1.93
AC005540.1-201ENST00000413911 UBN1Q9NPG3 1134 aa27.13■■□□□ 1.93
AC005540.1-201ENST00000413911 STK39Q9UEW8 545 aa27.13■■□□□ 1.93
AC005540.1-201ENST00000413911 VPS13AQ96RL7 3174 aa27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 INO80B-WBP1J3KQ70 363 aa27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 N4BP1O75113 896 aaKnown RBP27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 ARF4P18085 180 aaPredicted RBP27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 AXLP30530 894 aa27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 NUBP1P53384 320 aa27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 MXD4Q14582 209 aaPredicted RBP27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 ME3Q16798 604 aa27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 NOTUMQ6P988 496 aa27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 CCDC149Q6ZUS6 474 aa27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 CDR2LQ86X02 465 aaPredicted RBP27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 GSTCDQ8NEC7 633 aa27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 APOL6Q9BWW8 343 aa27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 NXF3Q9H4D5 531 aaKnown RBP27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 MAN1C1Q9NR34 630 aa27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 PCDHA12Q9UN75 941 aa27.12■■□□□ 1.93
AC005540.1-201ENST00000413911 B4GALT5O43286 388 aa27.11■■□□□ 1.93
AC005540.1-201ENST00000413911 GFRA3O60609 400 aa27.11■■□□□ 1.93
AC005540.1-201ENST00000413911 URODP06132 367 aa27.11■■□□□ 1.93
AC005540.1-201ENST00000413911 GLRA2P23416 452 aa27.11■■□□□ 1.93
AC005540.1-201ENST00000413911 POU5F1BQ06416 359 aa27.11■■□□□ 1.93
AC005540.1-201ENST00000413911 ASTLQ6HA08 431 aaPredicted RBP27.11■■□□□ 1.93
AC005540.1-201ENST00000413911 CCDC51Q96ER9 411 aa27.11■■□□□ 1.93
AC005540.1-201ENST00000413911 B3GALT6Q96L58 329 aa27.11■■□□□ 1.93
AC005540.1-201ENST00000413911 SPDYE4A6NLX3 237 aa27.1■■□□□ 1.93
AC005540.1-201ENST00000413911 BTBD18B2RXH4 712 aa27.1■■□□□ 1.93
AC005540.1-201ENST00000413911 PCBP1Q15365 356 aaKnown RBP eCLIP27.1■■□□□ 1.93
AC005540.1-201ENST00000413911 CALCRLQ16602 461 aa27.1■■□□□ 1.93
AC005540.1-201ENST00000413911 C15orf39Q6ZRI6 1047 aa27.1■■□□□ 1.93
AC005540.1-201ENST00000413911 OTOP3Q7RTS5 596 aa27.1■■□□□ 1.93
AC005540.1-201ENST00000413911 PIGOQ8TEQ8 1089 aa27.1■■□□□ 1.93
AC005540.1-201ENST00000413911 WASF1Q92558 559 aa27.1■■□□□ 1.93
AC005540.1-201ENST00000413911 ACSF2Q96CM8 615 aaPredicted RBP27.1■■□□□ 1.93
AC005540.1-201ENST00000413911 TTC12Q9H892 705 aaPredicted RBP27.1■■□□□ 1.93
AC005540.1-201ENST00000413911 KCNK12Q9HB15 430 aa27.1■■□□□ 1.93
AC005540.1-201ENST00000413911 RXFP1Q9HBX9 757 aa27.1■■□□□ 1.93
AC005540.1-201ENST00000413911 ANKEF1Q9NU02 776 aa27.1■■□□□ 1.93
AC005540.1-201ENST00000413911 ST18O60284 1047 aa27.09■■□□□ 1.93
AC005540.1-201ENST00000413911 DGAT1O75907 488 aa27.09■■□□□ 1.93
AC005540.1-201ENST00000413911 AKAP5P24588 427 aa27.09■■□□□ 1.93
AC005540.1-201ENST00000413911 RARRES1P49788 294 aa27.09■■□□□ 1.93
AC005540.1-201ENST00000413911 TFDP1Q14186 410 aa27.09■■□□□ 1.93
AC005540.1-201ENST00000413911 CWF19L1Q69YN2 538 aaKnown RBP27.09■■□□□ 1.93
AC005540.1-201ENST00000413911 CMASQ8NFW8 434 aaPredicted RBP27.09■■□□□ 1.93
AC005540.1-201ENST00000413911 MTMR9Q96QG7 549 aa27.09■■□□□ 1.93
AC005540.1-201ENST00000413911 IRF2BPLQ9H1B7 796 aa27.09■■□□□ 1.93
AC005540.1-201ENST00000413911 RFPL2O75678 378 aa27.08■■□□□ 1.93
AC005540.1-201ENST00000413911 SPATA31D3P0C874 917 aa27.08■■□□□ 1.93
AC005540.1-201ENST00000413911 NPR3P17342 541 aa27.08■■□□□ 1.93
AC005540.1-201ENST00000413911 TXKP42681 527 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms