RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 GET4Q7L5D6 327 aaPredicted RBP10.72□□□□□ -0.69
RFFL-203ENST00000413582 DHX32Q7L7V1 743 aaKnown RBP10.72□□□□□ -0.69
RFFL-203ENST00000413582 TAS1R1Q7RTX1 841 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 COLGALT2Q8IYK4 626 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 RDM1Q8NG50 284 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 ANO2Q9NQ90 1003 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 KANSL3Q9P2N6 904 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 DPP7Q9UHL4 492 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 NUMBLQ9Y6R0 609 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 NID2Q14112 1375 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 F5P12259 2224 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 USP24Q9UPU5 2620 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 F8W810 466 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 KINO60870 393 aaKnown RBP10.71□□□□□ -0.69
RFFL-203ENST00000413582 MAFO75444 373 aaPredicted RBP10.71□□□□□ -0.69
RFFL-203ENST00000413582 ALDH2P05091 517 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 SPATA31D3P0C874 917 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 GNA11P29992 359 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 HOXA11P31270 313 aaPredicted RBP10.71□□□□□ -0.69
RFFL-203ENST00000413582 STARD6P59095 220 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 DSG1Q02413 1049 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 DSC1Q08554 894 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 ADCK5Q3MIX3 580 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 BMP2KLQ5H9B9 411 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 KIAA0319Q5VV43 1072 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 ARID2Q68CP9 1835 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 SPATA31D4Q6ZUB0 917 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 MIER3Q7Z3K6 550 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 ST13P5Q8NFI4 369 aaPredicted RBP10.71□□□□□ -0.69
RFFL-203ENST00000413582 HDAC7Q8WUI4 952 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 FAM193BQ96PV7 902 aaPredicted RBP10.71□□□□□ -0.69
RFFL-203ENST00000413582 NT5C3AQ9H0P0 336 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 ZDHHC7Q9NXF8 308 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.71□□□□□ -0.69
RFFL-203ENST00000413582 SSX2IPQ9Y2D8 614 aa10.71□□□□□ -0.69
RFFL-203ENST00000413582 SPTLC1O15269 473 aa10.7□□□□□ -0.7
RFFL-203ENST00000413582 TGM5O43548 720 aa10.7□□□□□ -0.7
RFFL-203ENST00000413582 C1RP00736 705 aa10.7□□□□□ -0.7
RFFL-203ENST00000413582 NCLP19338 710 aaKnown RBP10.7□□□□□ -0.7
RFFL-203ENST00000413582 ZNF528Q3MIS6 628 aa10.7□□□□□ -0.7
RFFL-203ENST00000413582 RNF20Q5VTR2 975 aa10.7□□□□□ -0.7
RFFL-203ENST00000413582 PLA2G4FQ68DD2 849 aa10.7□□□□□ -0.7
RFFL-203ENST00000413582 ANO5Q75V66 913 aa10.7□□□□□ -0.7
RFFL-203ENST00000413582 SMG8Q8ND04 991 aaKnown RBP10.7□□□□□ -0.7
RFFL-203ENST00000413582 BICD2Q8TD16 824 aa10.7□□□□□ -0.7
RFFL-203ENST00000413582 JPH2Q9BR39 696 aaPredicted RBP10.7□□□□□ -0.7
RFFL-203ENST00000413582 RPP25Q9BUL9 199 aaKnown RBP10.7□□□□□ -0.7
RFFL-203ENST00000413582 DDX23Q9BUQ8 820 aaKnown RBP10.7□□□□□ -0.7
RFFL-203ENST00000413582 PLEKHA4Q9H4M7 779 aa10.7□□□□□ -0.7
RFFL-203ENST00000413582 MINDY3Q9H8M7 445 aa10.7□□□□□ -0.7
RFFL-203ENST00000413582 PIDD1Q9HB75 910 aa10.7□□□□□ -0.7
RFFL-203ENST00000413582 CHST7Q9NS84 486 aa10.7□□□□□ -0.7
RFFL-203ENST00000413582 COL4A3BPQ9Y5P4 624 aa10.7□□□□□ -0.7
RFFL-203ENST00000413582 CNOT1A5YKK6 2376 aaKnown RBP10.7□□□□□ -0.7
RFFL-203ENST00000413582 NOTCH4Q99466 2003 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 CCDC196A0A1B0GTZ2 297 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 DDX11L8A8MPP1 907 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 PRPF3O43395 683 aaKnown RBP10.69□□□□□ -0.7
RFFL-203ENST00000413582 TDP2O95551 362 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 MLH1P40692 756 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 OR1G1P47890 313 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 USP11P51784 963 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 GPC5P78333 572 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 Q4G0T1 1027 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 VARS2Q5ST30 1063 aaKnown RBP10.69□□□□□ -0.7
RFFL-203ENST00000413582 LILRA6Q6PI73 481 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 SRGAP1Q7Z6B7 1085 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 PALB2Q86YC2 1186 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 RASEFQ8IZ41 740 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 CCDC148Q8NFR7 591 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 ETNPPLQ8TBG4 499 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 SPOCK2Q92563 424 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 FGF14Q92915 247 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 PHKBQ93100 1093 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 SHDQ96IW2 340 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 B3GALT6Q96L58 329 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 ZFP42Q96MM3 310 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 MBOAT7Q96N66 472 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 GAD1Q99259 594 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 PRKD2Q9BZL6 878 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.69□□□□□ -0.7
RFFL-203ENST00000413582 NCDNQ9UBB6 729 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 FBXO4Q9UKT5 387 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 NAP1L2Q9ULW6 460 aaPredicted RBP10.69□□□□□ -0.7
RFFL-203ENST00000413582 IPPQ9Y573 584 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 CFAP47Q6ZTR5 3102 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 CHD6Q8TD26 2715 aa10.69□□□□□ -0.7
RFFL-203ENST00000413582 KANSL1LA0AUZ9 987 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 ARL5CA6NH57 179 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 LAMTOR5O43504 91 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 EIF5BO60841 1220 aaKnown RBP10.68□□□□□ -0.7
RFFL-203ENST00000413582 ZMYND10O75800 440 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 ITGA4P13612 1032 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 RPL17P18621 184 aaKnown RBP10.68□□□□□ -0.7
RFFL-203ENST00000413582 SCNN1GP51170 649 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 ATXN1P54253 815 aaKnown RBP10.68□□□□□ -0.7
RFFL-203ENST00000413582 NPEPPSP55786 919 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 PSMC5P62195 406 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 MLF2Q15773 248 aaPredicted RBP10.68□□□□□ -0.7
RFFL-203ENST00000413582 TSGA10IPQ3SY00 556 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms