RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 RHOBTB1O94844 696 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 MS4A1P11836 297 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 MARK3P27448 753 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 MAPK8P45983 427 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 IRX4P78413 519 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 NTHL1P78549 312 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 KRT76Q01546 638 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 SP4Q02446 784 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 SEMA3BQ13214 749 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 LRRC32Q14392 662 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 SBK1Q52WX2 424 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 METTL7BQ6UX53 244 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 CYFIP1Q7L576 1253 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 KRT25Q7Z3Z0 450 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 GRASPQ7Z6J2 395 aaPredicted RBP8.1□□□□□ -1.11
UBE2F-204ENST00000409953 WDR63Q8IWG1 891 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 PNPLA1Q8N8W4 532 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 HELQQ8TDG4 1101 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 DCAF4Q8WV16 495 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 CLUAP1Q96AJ1 413 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 PLCD4Q9BRC7 762 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 MRPL9Q9BYD2 267 aaKnown RBP8.1□□□□□ -1.11
UBE2F-204ENST00000409953 TRIM4Q9C037 500 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 MRPL17Q9NRX2 175 aaKnown RBP8.1□□□□□ -1.11
UBE2F-204ENST00000409953 TELO2Q9Y4R8 837 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 PIAS3Q9Y6X2 628 aa8.1□□□□□ -1.11
UBE2F-204ENST00000409953 CCDC194A0A1B0GVG4 234 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 UPK3BL1B0FP48 263 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 UPK3BL2E5RIL1 263 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 GOLIM4O00461 696 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 TEX28O15482 410 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 MEFVO15553 781 aaPredicted RBP8.09□□□□□ -1.11
UBE2F-204ENST00000409953 ECI2O75521 394 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 CFBP00751 764 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 AK2P54819 239 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 TFAP4Q01664 338 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 ODR4Q5SWX8 454 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 GPR155Q7Z3F1 870 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 PRICKLE2Q7Z3G6 844 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 TMEM40Q8WWA1 233 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 NLRP7Q8WX94 980 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 EAF2Q96CJ1 260 aaPredicted RBP8.09□□□□□ -1.11
UBE2F-204ENST00000409953 PLA2G2FQ9BZM2 168 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 SEMA4CQ9C0C4 833 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 ATMQ13315 3056 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 WDR81Q562E7 1941 aa8.09□□□□□ -1.11
UBE2F-204ENST00000409953 SALL3Q9BXA9 1300 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 CCDC163A0A0D9SF12 145 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 ERVH48-1M5A8F1 160 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 GPR182O15218 404 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 URODP06132 367 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 FTH1P19P0C7X4 201 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 HSPD1P10809 573 aaKnown RBP8.08□□□□□ -1.12
UBE2F-204ENST00000409953 C6P13671 934 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 CD46P15529 392 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 CCNE1P24864 410 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 ADD2P35612 726 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 GRM2Q14416 872 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 DSC3Q14574 896 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 SWT1Q5T5J6 900 aaKnown RBP8.08□□□□□ -1.12
UBE2F-204ENST00000409953 PDXDC2PQ6P474 469 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 ECHDC2Q86YB7 292 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 ZNF280BQ86YH2 543 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 FMNL3Q8IVF7 1028 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 PLEKHM2Q8IWE5 1019 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 NPAS3Q8IXF0 933 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 CCDC82Q8N4S0 544 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 IL31RAQ8NI17 732 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 ITFG1Q8TB96 612 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 WHAMMQ8TF30 809 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 HDAC7Q8WUI4 952 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 SSH1Q8WYL5 1049 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 DNAJC2Q99543 621 aaKnown RBP8.08□□□□□ -1.12
UBE2F-204ENST00000409953 PDCD2LQ9BRP1 358 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 FAM117AQ9C073 453 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 MAF1Q9H063 256 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 PLEKHA4Q9H4M7 779 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 BRD9Q9H8M2 597 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 SALL2Q9Y467 1007 aaPredicted RBP8.08□□□□□ -1.12
UBE2F-204ENST00000409953 COL4A2P08572 1712 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 DOCK6Q96HP0 2047 aa8.08□□□□□ -1.12
UBE2F-204ENST00000409953 CARNS1A5YM72 827 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 DCLK1O15075 740 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 EXTL3O43909 919 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 CHGBP05060 677 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 GALTP07902 379 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 POU3F2P20265 443 aaPredicted RBP8.07□□□□□ -1.12
UBE2F-204ENST00000409953 LMAN2Q12907 356 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 SERINC3Q13530 473 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 NEDD9Q14511 834 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 LRRC69Q6ZNQ3 347 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 CYP2U1Q7Z449 544 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 FAM228AQ86W67 206 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 PALB2Q86YC2 1186 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 MCF2L2Q86YR7 1114 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 RPS6KC1Q96S38 1066 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 ERAP1Q9NZ08 941 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 STK39Q9UEW8 545 aa8.07□□□□□ -1.12
UBE2F-204ENST00000409953 MUC22E2RYF6 1773 aaPredicted RBP8.07□□□□□ -1.12
UBE2F-204ENST00000409953 NUP205Q92621 2012 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms