RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 PAK6Q9NQU5 681 aaPredicted RBP15.34■□□□□ 0.05
LIMS2-206ENST00000409754 MYO1AQ9UBC5 1043 aa15.34■□□□□ 0.05
LIMS2-206ENST00000409754 PLEKP08567 350 aaPredicted RBP15.33■□□□□ 0.04
LIMS2-206ENST00000409754 TRIM49P0CI25 452 aa15.33■□□□□ 0.04
LIMS2-206ENST00000409754 TRIM49CP0CI26 452 aa15.33■□□□□ 0.04
LIMS2-206ENST00000409754 CCL5P13501 91 aa15.33■□□□□ 0.04
LIMS2-206ENST00000409754 GARTP22102 1010 aa15.33■□□□□ 0.04
LIMS2-206ENST00000409754 CASQ1P31415 396 aa15.33■□□□□ 0.04
LIMS2-206ENST00000409754 EIF4A3P38919 411 aaKnown RBP15.33■□□□□ 0.04
LIMS2-206ENST00000409754 ARHGAP1Q07960 439 aa15.33■□□□□ 0.04
LIMS2-206ENST00000409754 PLCB4Q15147 1175 aa15.33■□□□□ 0.04
LIMS2-206ENST00000409754 SLC39A4Q6P5W5 647 aa15.33■□□□□ 0.04
LIMS2-206ENST00000409754 TAS1R3Q7RTX0 852 aa15.33■□□□□ 0.04
LIMS2-206ENST00000409754 FBXL18Q96ME1 805 aa15.33■□□□□ 0.04
LIMS2-206ENST00000409754 WDR24Q96S15 920 aa15.33■□□□□ 0.04
LIMS2-206ENST00000409754 DEF6Q9H4E7 631 aa15.33■□□□□ 0.04
LIMS2-206ENST00000409754 FANCGO15287 622 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 PMM2O15305 246 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 GH1P01241 217 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 KIF11P52732 1056 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 MYL7Q01449 175 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 ENPEPQ07075 957 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 RAPGEF1Q13905 1077 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 SPA17Q15506 151 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 ASTE1Q2TB18 679 aaPredicted RBP15.32■□□□□ 0.04
LIMS2-206ENST00000409754 CBWD6Q4V339 395 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 CBWD3Q5JTY5 395 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 CBWD5Q5RIA9 395 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 MSL3Q8N5Y2 521 aaKnown RBP15.32■□□□□ 0.04
LIMS2-206ENST00000409754 DEPTORQ8TB45 409 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 EMID1Q96A84 441 aaPredicted RBP15.32■□□□□ 0.04
LIMS2-206ENST00000409754 SPAG5Q96R06 1193 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 JPH2Q9BR39 696 aaPredicted RBP15.32■□□□□ 0.04
LIMS2-206ENST00000409754 TMEM134Q9H6X4 195 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 FHOD1Q9Y613 1164 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 IGKV6-21A0A0C4DH24 114 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 DYNC1I1O14576 645 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 HNRNPDLO14979 420 aaKnown RBP15.32■□□□□ 0.04
LIMS2-206ENST00000409754 KIAA0391O15091 583 aaKnown RBP15.32■□□□□ 0.04
LIMS2-206ENST00000409754 AKR1B10O60218 316 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 PIGRP01833 764 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 IRX5P78411 483 aaPredicted RBP15.32■□□□□ 0.04
LIMS2-206ENST00000409754 CETN1Q12798 172 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 STRN3Q13033 797 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 ASIC2Q16515 512 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 SNRNP35Q16560 246 aaKnown RBP15.32■□□□□ 0.04
LIMS2-206ENST00000409754 IER5Q5VY09 327 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 LHX8Q68G74 356 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 KIAA1328Q86T90 577 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 TRIM50Q86XT4 487 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 TCP11Q8WWU5 503 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 BICD1Q96G01 975 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.32■□□□□ 0.04
LIMS2-206ENST00000409754 SLC5A4Q9NY91 659 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 STYXL1Q9Y6J8 313 aa15.32■□□□□ 0.04
LIMS2-206ENST00000409754 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.31■□□□□ 0.04
LIMS2-206ENST00000409754 LRRIQ4A6NIV6 560 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 ZBTB42B2RXF5 422 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 CTIFO43310 598 aaKnown RBP15.31■□□□□ 0.04
LIMS2-206ENST00000409754 HBP1O60381 514 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 ADRB2P07550 413 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 RFX1P22670 979 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 MARK3P27448 753 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 VAV2P52735 878 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 JAM2P57087 298 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 DLG4P78352 724 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 TDRD12Q587J7 1177 aaKnown RBP15.31■□□□□ 0.04
LIMS2-206ENST00000409754 C1orf220Q5T0J3 134 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 MFSD14CQ5VZR4 134 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 ZSWIM2Q8NEG5 633 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 PPTC7Q8NI37 304 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 PLEKHO2Q8TD55 490 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 TMC2Q8TDI7 906 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 POMGNT1Q8WZA1 660 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 JAKMIP2Q96AA8 810 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 MFSD14AQ96MC6 490 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 IRX2Q9BZI1 471 aaPredicted RBP15.31■□□□□ 0.04
LIMS2-206ENST00000409754 TSGA10Q9BZW7 698 aa15.31■□□□□ 0.04
LIMS2-206ENST00000409754 INTS2Q9H0H0 1204 aaKnown RBP15.31■□□□□ 0.04
LIMS2-206ENST00000409754 BZW2Q9Y6E2 419 aaKnown RBP15.31■□□□□ 0.04
LIMS2-206ENST00000409754 GOLGA8IPA6NC78 632 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 GOLGA8JA6NMD2 632 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 RBAK-RBAKDNI3L0D1 243 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 K7ERI5 159 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 ZNF263O14978 683 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 KRT86O43790 486 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 LIG4P49917 911 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 MNX1P50219 401 aaPredicted RBP15.3■□□□□ 0.04
LIMS2-206ENST00000409754 PPP3CAQ08209 521 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 KLHL30Q0D2K2 578 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 ACVR2BQ13705 512 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 CAPSQ13938 189 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 HSP90AA2PQ14568 343 aaPredicted RBP15.3■□□□□ 0.04
LIMS2-206ENST00000409754 ZNF569Q5MCW4 686 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 GJC2Q5T442 439 aaPredicted RBP15.3■□□□□ 0.04
LIMS2-206ENST00000409754 IQCEQ6IPM2 695 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 USP37Q86T82 979 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 CBWD2Q8IUF1 395 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 GPD1LQ8N335 351 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 TXLNBQ8N3L3 684 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms